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(-) Description

Title :  CYTOPLASMIC DOMAIN OF THE HUMAN CHLORIDE TRANSPORTER CLC-5 IN COMPLEX WITH ATP
 
Authors :  S. Meyer, S. Savaresi, I. C. Forster, R. Dutzler
Date :  13 Nov 06  (Deposition) - 04 Jan 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Chloride Channel, Ion Channel, Ion Transport, Voltage-Gated Channel (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Meyer, S. Savaresi, I. C. Forster, R. Dutzler
Nucleotide Recognition By The Cytoplasmic Domain Of The Human Chloride Transporter Clc-5
Nat. Struct. Mol. Biol. V. 14 60 2006
PubMed-ID: 17195847  |  Reference-DOI: 10.1038/NSMB1188

(-) Compounds

Molecule 1 - CHLORIDE CHANNEL PROTEIN 5
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET28B
    Expression System Vector Type: PLASMID
    Fragment: CYTOPLASMIC DOMAIN, RESIDUES 571-746
    Organ: KIDNEY
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CHLORIDE TRANSPORTER CLC-5, CLC-5
    Tissue: EPITHELIUM

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric/Biological Unit (2, 16)
No.NameCountTypeFull Name
1ATP6Ligand/IonADENOSINE-5'-TRIPHOSPHATE
2CL10Ligand/IonCHLORIDE ION

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:718 , ARG B:718BINDING SITE FOR RESIDUE CL A1753
02AC2SOFTWAREARG B:630BINDING SITE FOR RESIDUE CL B3001
03AC3SOFTWAREASN C:716 , ARG D:630BINDING SITE FOR RESIDUE CL C1756
04AC4SOFTWAREARG C:718 , ARG D:718BINDING SITE FOR RESIDUE CL D1754
05AC5SOFTWAREARG D:589BINDING SITE FOR RESIDUE CL D1755
06AC6SOFTWAREARG C:630 , ASN D:716BINDING SITE FOR RESIDUE CL D3001
07AC7SOFTWAREARG E:630BINDING SITE FOR RESIDUE CL E1753
08AC8SOFTWAREARG F:630BINDING SITE FOR RESIDUE CL F1751
09AC9SOFTWARELYS A:587 , LEU A:595 , THR A:596 , THR A:616 , TYR A:617 , SER A:618 , GLY A:619 , ILE A:722 , THR A:724 , LYS A:726 , ASP A:727 , HOH A:2009 , HOH A:2041 , HOH A:2042 , HOH A:2043BINDING SITE FOR RESIDUE ATP A1752
10BC1SOFTWARELYS B:587 , LEU B:595 , THR B:596 , TYR B:617 , SER B:618 , GLY B:619 , PRO B:621 , ILE B:722 , THR B:724 , LYS B:726 , ASP B:727 , HOH B:2039 , HOH B:2040 , HOH B:2041 , HOH B:2042 , HOH B:2043 , HOH B:2044 , HOH B:2045BINDING SITE FOR RESIDUE ATP B1754
11BC2SOFTWARELYS C:587 , LEU C:595 , THR C:596 , THR C:616 , TYR C:617 , SER C:618 , GLY C:619 , ILE C:722 , THR C:724 , LYS C:726 , ASP C:727 , HOH C:2059 , HOH C:2063 , HOH C:2064 , HOH C:2065 , HOH C:2066 , HOH C:2067BINDING SITE FOR RESIDUE ATP C1755
12BC3SOFTWARELYS D:587 , LEU D:595 , THR D:596 , THR D:616 , TYR D:617 , SER D:618 , GLY D:619 , THR D:724 , LYS D:726 , ASP D:727 , HOH D:2054 , HOH D:2055 , HOH D:2056 , HOH D:2057 , HOH D:2058BINDING SITE FOR RESIDUE ATP D1753
13BC4SOFTWARELYS E:587 , LEU E:595 , THR E:596 , TYR E:617 , SER E:618 , GLY E:619 , PRO E:621 , ILE E:722 , THR E:724 , LYS E:726 , ASP E:727 , HOH E:2028 , HOH E:2032 , HOH E:2033BINDING SITE FOR RESIDUE ATP E1752
14BC5SOFTWARELYS F:587 , LEU F:595 , THR F:596 , TYR F:617 , SER F:618 , GLY F:619 , PRO F:621 , ILE F:722 , THR F:724 , LYS F:726 , ASP F:727 , HOH F:2005 , HOH F:2021BINDING SITE FOR RESIDUE ATP F1750

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2J9L)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Lys A:587 -Pro A:588
2Lys B:587 -Pro B:588
3Lys C:587 -Pro C:588
4Lys D:587 -Pro D:588
5Lys E:587 -Pro E:588
6Lys F:587 -Pro F:588

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 6)

Asymmetric/Biological Unit (1, 6)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_065615T657SCLCN5_HUMANDisease (NPHL2)144207967A/B/C/D/E/FT657S
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 12)

Asymmetric/Biological Unit (1, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CBSPS51371 CBS domain profile.CLCN5_HUMAN586-650
 
 
 
 
 
682-742
 
 
 
 
 		  12A:586-650
B:586-650
C:586-650
D:586-650
E:586-650
F:586-649
A:682-737
B:682-738
C:682-738
D:682-739
E:682-737
F:682-735

(-) Exons   (3, 18)

Asymmetric/Biological Unit (3, 18)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.6ENST000003761086ENSE00001469348X:49832231-49832415185CLCN5_HUMAN-00--
1.8ENST000003761088ENSE00001792177X:49834534-49834685152CLCN5_HUMAN1-35350--
1.9ENST000003761089ENSE00001149580X:49837144-49837243100CLCN5_HUMAN36-69340--
1.10ENST0000037610810ENSE00001149569X:49840450-49840637188CLCN5_HUMAN69-131630--
1.11ENST0000037610811ENSE00001149559X:49845251-49845373123CLCN5_HUMAN132-172410--
1.12ENST0000037610812ENSE00001149548X:49846298-49846504207CLCN5_HUMAN173-241690--
1.13ENST0000037610813ENSE00001149540X:49850637-4985071781CLCN5_HUMAN242-268270--
1.14ENST0000037610814ENSE00001149530X:49850985-49851527543CLCN5_HUMAN269-4491810--
1.15ENST0000037610815ENSE00001149517X:49853355-49853541187CLCN5_HUMAN450-512630--
1.16ENST0000037610816ENSE00001149510X:49854773-49855171399CLCN5_HUMAN512-6451346A:578-645
B:578-645
C:578-645
D:578-645
E:578-645
F:578-645		68
68
68
68
68
68
1.17ENST0000037610817ENSE00001149502X:49855327-49855543217CLCN5_HUMAN645-717736A:645-717
B:645-717
C:645-717
D:645-717
E:645-717
F:645-717 (gaps)		73
73
73
73
73
73
1.18aENST0000037610818aENSE00001942032X:49856786-49857063278CLCN5_HUMAN717-746306A:717-751 (gaps)
B:717-753 (gaps)
C:717-754 (gaps)
D:717-746 (gaps)
E:717-751 (gaps)
F:717-746 (gaps)		35
37
38
30
35
30

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:167
 aligned with CLCN5_HUMAN | P51795 from UniProtKB/Swiss-Prot  Length:746

    Alignment length:169
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737         
          CLCN5_HUMAN   578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQDPDSILFN 746
               SCOP domains d2j9la1 A:578-746 Chloride channel protein 5, ClC-5                                                                                                                 ----- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh...........ee...eehhhhhhhhhhh...eeeee.......eeeeeehhhhhhhhhhhhh.........eee...............ee....ee....eee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhhhhhhhh.--....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------S----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------CBS  PDB: A:586-650 UniProt: 586-650                             -------------------------------CBS  PDB: A:682-737 UniProt: 682-742                         ---- PROSITE
           Transcript 1 (1) Exon 1.16  PDB: A:578-645 UniProt: 512-645 [INCOMPLETE]             -----------------------------------------------------------------------Exon 1.18a UniProt: 717-746    Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------Exon 1.17  PDB: A:645-717 UniProt: 645-717                               ----------------------------- Transcript 1 (2)
                 2j9l A 578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMAN--FNEFLEV 751
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737  |      
                                                                                                                                                                                         737  |      
                                                                                                                                                                                            745      


Chain B from PDB  Type:PROTEIN  Length:171
 aligned with CLCN5_HUMAN | P51795 from UniProtKB/Swiss-Prot  Length:746

    Alignment length:171
                                                                                                                                                                                          738 739      
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737|   |  744 
          CLCN5_HUMAN   578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQ---DPDSILF 745
               SCOP domains d2j9lb_ B: automated matches                                                                                                                                                SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh...........ee...eehhhhhhhhhhh...eeeee.......eeeeeehhhhhhhhhhhhhhh.......eee...............ee....ee....eee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhhhhhhhhh.hhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------S------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------CBS  PDB: B:586-650 UniProt: 586-650                             -------------------------------CBS  PDB: B:682-738 UniProt: 682-742                            --- PROSITE
           Transcript 1 (1) Exon 1.16  PDB: B:578-645 UniProt: 512-645 [INCOMPLETE]             -----------------------------------------------------------------------Exon 1.18a  PDB: B:717-753 (gaps Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------Exon 1.17  PDB: B:645-717 UniProt: 645-717                               ------------------------------- Transcript 1 (2)
                 2j9l B 578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQLFNEFLEVLF 753
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737||     752 
                                                                                                                                                                                          738|         
                                                                                                                                                                                           744         


Chain C from PDB  Type:PROTEIN  Length:172
 aligned with CLCN5_HUMAN | P51795 from UniProtKB/Swiss-Prot  Length:746

    Alignment length:172
                                                                                                                                                                                          738 739       
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737|   |  744  
          CLCN5_HUMAN   578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQ---DPDSILFN 746
               SCOP domains d2j9lc_ C: automated matches                                                                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh...........ee...eehhhhhhhhhhh...eeeee.......eeeeeehhhhhhhhhhhhh.........eee...............ee....ee....eee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhhhhhhhh...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------S-------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------CBS  PDB: C:586-650 UniProt: 586-650                             -------------------------------CBS  PDB: C:682-738 UniProt: 682-742                            ---- PROSITE
           Transcript 1 (1) Exon 1.16  PDB: C:578-645 UniProt: 512-645 [INCOMPLETE]             -----------------------------------------------------------------------Exon 1.18a  PDB: C:717-754 (gaps) Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------Exon 1.17  PDB: C:645-717 UniProt: 645-717                               -------------------------------- Transcript 1 (2)
                 2j9l C 578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQLFNEFLEVLFQ 754
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737||     752  
                                                                                                                                                                                          738|          
                                                                                                                                                                                           744          


Chain D from PDB  Type:PROTEIN  Length:171
 aligned with CLCN5_HUMAN | P51795 from UniProtKB/Swiss-Prot  Length:746

    Alignment length:175
                                                                                                                                                                                                  746      
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737        |-     
          CLCN5_HUMAN   578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQDPDSILFN------   -
               SCOP domains d2j9ld_ D: automated matches                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh...........ee....hhhhhhhhhhhh...eeeee.......eeeeeehhhhhhhhhhhhhh.........ee...............ee....ee....eee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhhhhhhhhh..----hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------S----------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------CBS  PDB: D:586-650 UniProt: 586-650                             -------------------------------CBS  PDB: D:682-739 UniProt: 682-742                         ---------- PROSITE
           Transcript 1 (1) Exon 1.16  PDB: D:578-645 UniProt: 512-645 [INCOMPLETE]             -----------------------------------------------------------------------Exon 1.18a UniProt: 717-746   ------ Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------Exon 1.17  PDB: D:645-717 UniProt: 645-717                               ----------------------------------- Transcript 1 (2)
                 2j9l D 578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQD----LFNEFLEVL 752
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737 |    |747     
                                                                                                                                                                                           739  744        


Chain E from PDB  Type:PROTEIN  Length:167
 aligned with CLCN5_HUMAN | P51795 from UniProtKB/Swiss-Prot  Length:746

    Alignment length:169
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737         
          CLCN5_HUMAN   578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQDPDSILFN 746
               SCOP domains d2j9le_ E: automated matches                                                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhh............ee...eehhhhhhhhhhh...eeeee.......eeeeeehhhhhhhhhhhh..........eee...............ee....ee....eee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhhhhhhhhh--.hhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------S----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------CBS  PDB: E:586-650 UniProt: 586-650                             -------------------------------CBS  PDB: E:682-737 UniProt: 682-742                         ---- PROSITE
           Transcript 1 (1) Exon 1.16  PDB: E:578-645 UniProt: 512-645 [INCOMPLETE]             -----------------------------------------------------------------------Exon 1.18a UniProt: 717-746    Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------Exon 1.17  PDB: E:645-717 UniProt: 645-717                               ----------------------------- Transcript 1 (2)
                 2j9l E 578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMAN--FNEFLEV 751
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737  |      
                                                                                                                                                                                         737  |      
                                                                                                                                                                                            745      


Chain F from PDB  Type:PROTEIN  Length:162
 aligned with CLCN5_HUMAN | P51795 from UniProtKB/Swiss-Prot  Length:746

    Alignment length:172
                                                                                                                                                                                                  746   
                                   587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737        |-  
          CLCN5_HUMAN   578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQDPDSILFN---   -
               SCOP domains d2j9lf_ F: automated matches                                                                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhh............ee...eehhhhhhhhh.....eeeee.......eeeeeehhhhhhhhhhhh.---......eee...............ee.hhhh.....eee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhhhhhhh-------..hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------S-------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------CBS  PDB: F:586-649 UniProt: 586-650                             -------------------------------CBS  PDB: F:682-735 UniProt: 682-742                         ------- PROSITE
           Transcript 1 (1) Exon 1.16  PDB: F:578-645 UniProt: 512-645 [INCOMPLETE]             -----------------------------------------------------------------------Exon 1.18a UniProt: 717-746   --- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------Exon 1.17  PDB: F:645-717 (gaps) UniProt: 645-717                        -------------------------------- Transcript 1 (2)
                 2j9l F 578 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARK---GVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQM-------ILFNEFL 749
                                   587       597       607       617       627       637       647 |   | 657       667       677       687       697       707       717       727       | -     | 747  
                                                                                                 649 653                                                                               735     743
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2J9L)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2J9L)

(-) Gene Ontology  (24, 24)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (CLCN5_HUMAN | P51795)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0015297    antiporter activity    Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
    GO:0005254    chloride channel activity    Enables the facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.
    GO:0005216    ion channel activity    Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005247    voltage-gated chloride channel activity    Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
biological process
    GO:1902476    chloride transmembrane transport    The directed movement of chloride across a membrane.
    GO:0006821    chloride transport    The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0007588    excretion    The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.
    GO:0034220    ion transmembrane transport    A process in which an ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
    GO:0006811    ion transport    The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:1903959    regulation of anion transmembrane transport    Any process that modulates the frequency, rate or extent of anion transmembrane transport.
    GO:0055085    transmembrane transport    The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0005794    Golgi apparatus    A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
    GO:0000139    Golgi membrane    The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
    GO:0045177    apical part of cell    The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.
    GO:0005768    endosome    A vacuole to which materials ingested by endocytosis are delivered.
    GO:0010008    endosome membrane    The lipid bilayer surrounding an endosome.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005765    lysosomal membrane    The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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        CLCN5_HUMAN | P51795: 2ja3

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