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(-) Description

Title :  OXACILLOYL-ACYLATED MECR1 EXTRACELLULAR ANTIBIOTIC-SENSOR DOMAIN.
 
Authors :  A. Marrero, G. Mallorqui-Fernandez, T. Guevara, R. Garcia-Castellanos, F. X. Gomis-Ruth
Date :  27 Jun 06  (Deposition) - 03 Jul 06  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Bacterial Antibiotic Resistance, Oxacillin, Beta-Lactamase, Mrsa, Antibiotic Resistance, Methicillin Resistance, Beta- Lactamic Antibiotics, Penicillin-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Marrero, G. Mallorqui-Fernandez, T. Guevara, R. Garcia-Castellanos, F. X. Gomis-Ruth
Unbound And Acylated Structures Of The Mecr1 Extracellular Antibiotic-Sensor Domain Provide Insights Into The Signal-Transduction System That Triggers Methicillin Resistance.
J. Mol. Biol. V. 361 506 2006
PubMed-ID: 16846613  |  Reference-DOI: 10.1016/J.JMB.2006.06.046

(-) Compounds

Molecule 1 - METHICILLIN RESISTANCE MECR1 PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Variant: DE3
    Fragment: EXTRACELLULAR PENICILLIN-SENSOR DOMAIN, RESIDUES 340-585
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 1280
    Strain: N315

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SOY1Mod. Amino AcidOXACILLIN-ACYLATED SERINE

(-) Sites  (0, 0)

(no "Site" information available for 2IWD)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2IWD)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2IWD)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2IWD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2IWD)

(-) Exons   (0, 0)

(no "Exon" information available for 2IWD)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:246
 aligned with MECR_STAAN | P0A0B0 from UniProtKB/Swiss-Prot  Length:585

    Alignment length:246
                                   349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579      
           MECR_STAAN   340 DKYETNVSYKKLNQLAPYFKGFDGSFVLYNEREQAYSIYNEPESKQRYSPNSTYKIYLALMAFDQNLLSLNHTEQQWDKHQYPFKEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKSYLDLIEYGNEEISGNENYWNESSLKISAIEQVNLLKNMKQHNMHFDNKAIEKVENSMTLKQKDTYKYVGKTGTGIVNHKEANGWFVGYVETKDNTYYFATHLKGEDNANGEKAQQISERILKEMELI 585
               SCOP domains d2iwda_ A: automated matches                                                                                                                                                                                                                           SCOP domains
               CATH domains 2iwdA00 A:340-585 DD-peptidase/beta-lactamase superfamily                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eee.hhhhhhhh..eeeeeeee....eeeeehhhhhhhee.....hhhhhhhhhhhh..................hhhhh...hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh...................eehhhhhhhhhhhhh.....hhhhhhhhhhhheeee...eeeeeeeeeeee..eeeeeeeeeeeee...eeeeeeeee.....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2iwd A 340 DKYETNVSYKKLNQLAPYFKGFDGSFVLYNEREQAYSIYNEPESKQRYSPNsTYKIYLALMAFDQNLLSLNHTEQQWDKHQYPFKEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKSYLDLIEYGNEEISGNENYWNESSLKISAIEQVNLLKNMKQHNMHFDNKAIEKVENSMTLKQKDTYKYVGKTGTGIVNHKEANGWFVGYVETKDNTYYFATHLKGEDNANGEKAQQISERILKEMELI 585
                                   349       359       369       379       389 |     399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579      
                                                                             391-SOY
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Multi-domain proteins (alpha and beta) (2421)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2IWD)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (MECR_STAAN | P0A0B0)
molecular function
    GO:0008658    penicillin binding    Interacting selectively and non-covalently with penicillin, any antibiotic that contains the condensed beta-lactamthiazolidine ring system.
biological process
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MECR_STAAN | P0A0B0: 2iwb 2iwc

(-) Related Entries Specified in the PDB File

2iwb MECR1 UNBOUND EXTRACELLULAR ANTIBIOTIC-SENSOR DOMAIN.
2iwc BENZYLPENICILLOYL-ACYLATED MECR1 EXTRACELLULAR ANTIBIOTIC-SENSOR DOMAIN.