Chain A from PDB Type:PROTEIN Length:211
aligned with Q7MHK3_VIBVY | Q7MHK3 from UniProtKB/TrEMBL Length:231
Alignment length:211
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Q7MHK3_VIBVY 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEHVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQ 229
SCOP domains d2ivka_ A: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhh............eeee..eeeehhhhhh.....hhhhhhheeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeehhhhhhhh..ee........ee......eee....eee.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhh.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ivk A 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEAVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQ 229
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Chain B from PDB Type:PROTEIN Length:213
aligned with Q7MHK3_VIBVY | Q7MHK3 from UniProtKB/TrEMBL Length:231
Alignment length:213
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Q7MHK3_VIBVY 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEHVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQTQ 231
SCOP domains d2ivkb_ B: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhh.........eeee..eeee.hhhhh.......hhhh.eeeee..hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....eeeeehhhhhhh...ee........eee..eeeee.....ee..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhh......hhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ivk B 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEAVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQTQ 231
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Chain C from PDB Type:PROTEIN Length:213
aligned with Q7MHK3_VIBVY | Q7MHK3 from UniProtKB/TrEMBL Length:231
Alignment length:213
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Q7MHK3_VIBVY 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEHVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQTQ 231
SCOP domains d2ivkc_ C: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhh.........eeee..eeee.hhhhh.....hhhhhh.eeeee..hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....eeeeehhhhhhh...ee........eee..eeeee.....ee..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhh......hhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ivk C 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEAVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQTQ 231
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Chain D from PDB Type:PROTEIN Length:211
aligned with Q7MHK3_VIBVY | Q7MHK3 from UniProtKB/TrEMBL Length:231
Alignment length:211
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Q7MHK3_VIBVY 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEHVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQ 229
SCOP domains d2ivkd_ D: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhh............eeee..eeeehhhhhh.....hhhhhhheeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeehhhhhhhh..ee........ee......eee....eee.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhh.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ivk D 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEAVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQ 229
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Chain E from PDB Type:DNA Length:15
2ivk E 1 GAATTCGATCGAATT 15
10
Chain F from PDB Type:DNA Length:15
2ivk F 18 AATTCGATCGAATTC 32
27
Chain G from PDB Type:DNA Length:15
2ivk G 1 GAATTCGATCGAATT 15
10
Chain H from PDB Type:DNA Length:15
2ivk H 18 AATTCGATCGAATTC 32
27
Chain I from PDB Type:DNA Length:16
2ivk I 1 GAATTCGATCGAATTC 16
10
Chain J from PDB Type:DNA Length:16
2ivk J 17 GAATTCGATCGAATTC 32
26
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |