2IFA - JenaLib

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Asymmetric Unit (Jmol Viewer)

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Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE PUTATIVE NITROREDUCTASE (SMU.260) IN COMPLEX WITH FMN FROM STREPTOCOCCUS MUTANS, NORTHEAST STRUCTURAL GENOMICS TARGET SMR5.

Authors :   F. Forouhar, Y. Chen, R. Xiao, L. C. Ma, T. Byler, T. B. Acton, G. T. Montel L. Tong, J. F. Hunt, Northeast Structural Genomics Consortium (N

Date :   20 Sep 06 (Deposition) - 03 Oct 06 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)

Keywords :   Alpha-Beta Protein, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :

PubMed: search

Molecule 1 - HYPOTHETICAL PROTEIN SMU.260
	Chains	:	A, B, C, D, E, F
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET21
	Expression System Strain	:	BL21(DE3)+MAGIC
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	SMU.260
	Organism Scientific	:	STREPTOCOCCUS MUTANS
	Organism Taxid	:	210007
	Strain	:	UA159

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 24)

No.	Name	Count	Type	Full Name
1	FMN	6	Ligand/Ion	FLAVIN MONONUCLEOTIDE
2	MSE	18	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (2, 8)

No.	Name	Count	Type	Full Name
1	FMN	2	Ligand/Ion	FLAVIN MONONUCLEOTIDE
2	MSE	6	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 2 (2, 8)

No.	Name	Count	Type	Full Name
1	FMN	2	Ligand/Ion	FLAVIN MONONUCLEOTIDE
2	MSE	6	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 3 (2, 8)

No.	Name	Count	Type	Full Name
1	FMN	2	Ligand/Ion	FLAVIN MONONUCLEOTIDE
2	MSE	6	Mod. Amino Acid	SELENOMETHIONINE

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:11 , ARG A:12 , SER A:13 , TYR A:15 , TRP A:135 , VAL A:147 , GLN A:148 , HIS A:149 , LYS A:186 , HOH A:509 , HOH A:529 , HOH A:578 , HOH A:617 , PRO B:40 , SER B:41 , ALA B:42 , PHE B:43 , ASN B:44 , TRP B:122 , GLN B:125 , ILE B:129 , ASN D:107 , GLU D:110 , ASN D:111 , HOH D:572	BINDING SITE FOR RESIDUE FMN A 501
2	AC2	SOFTWARE	PRO A:40 , SER A:41 , ALA A:42 , PHE A:43 , ASN A:44 , TRP A:122 , GLN A:125 , ILE A:129 , ARG B:11 , ARG B:12 , SER B:13 , TYR B:15 , VAL B:147 , GLN B:148 , HIS B:149 , LYS B:186 , HOH B:515 , HOH B:605 , HOH E:536	BINDING SITE FOR RESIDUE FMN B 502
3	AC3	SOFTWARE	ASN B:111 , HOH B:537 , ARG C:11 , ARG C:12 , SER C:13 , TYR C:15 , VAL C:147 , GLN C:148 , HIS C:149 , LYS C:186 , HOH C:546 , HOH C:569 , PRO D:40 , SER D:41 , ALA D:42 , PHE D:43 , ASN D:44 , TRP D:122 , GLN D:125 , ILE D:129	BINDING SITE FOR RESIDUE FMN C 503
4	AC4	SOFTWARE	PRO C:40 , SER C:41 , ALA C:42 , PHE C:43 , ASN C:44 , TRP C:122 , GLN C:125 , ILE C:129 , ARG D:11 , ARG D:12 , SER D:13 , TYR D:15 , TRP D:135 , VAL D:147 , GLN D:148 , HIS D:149 , LYS D:186 , HOH D:525 , ASN F:107 , GLU F:110 , ASN F:111	BINDING SITE FOR RESIDUE FMN D 504
5	AC5	SOFTWARE	ASN C:107 , GLU C:110 , ASN C:111 , ARG E:11 , ARG E:12 , SER E:13 , TYR E:15 , VAL E:147 , GLN E:148 , HIS E:149 , LYS E:186 , HOH E:506 , HOH E:509 , HOH E:557 , PRO F:40 , SER F:41 , ALA F:42 , PHE F:43 , ASN F:44 , TRP F:122 , GLN F:125 , ILE F:129	BINDING SITE FOR RESIDUE FMN E 505
6	AC6	SOFTWARE	GLU A:110 , ASN A:111 , PRO E:40 , SER E:41 , ALA E:42 , PHE E:43 , ASN E:44 , TRP E:122 , GLN E:125 , ILE E:129 , ARG F:11 , ARG F:12 , SER F:13 , TYR F:15 , TRP F:135 , VAL F:147 , HIS F:149 , LYS F:186 , HOH F:517 , HOH F:527 , HOH F:542	BINDING SITE FOR RESIDUE FMN F 506

(no "SS Bond" information available for 2IFA)

Asymmetric Unit

No.	Residues
1	Asn A:151	-	Pro A:152
2	Asn B:151	-	Pro B:152
3	Asn C:151	-	Pro C:152
4	Asn D:151	-	Pro D:152
5	Asn E:151	-	Pro E:152
6	Asn F:151	-	Pro F:152

(no "SAP(SNP)/Variant" information available for 2IFA)

(no "PROSITE Motif" information available for 2IFA)

(no "Exon" information available for 2IFA)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:200
 aligned with Q8DW21_STRMU | Q8DW21 from UniProtKB/TrEMBL  Length:200

    Alignment length:200
                                                                                                                                                                                                                                200 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191        |-
         Q8DW21_STRMU     2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGMSVQHYNPLVDAQVAEKYDLPTNWKMRAQIPFGSIEAPAGEKEFMADQERFKVFGD-   -
               SCOP domains d2ifaa1 A:2-200 Hypothetical protein Smu.260                                                                                                                                                           - SCOP domains
               CATH domains 2ifaA00 A:2-201 NADH Oxidase                                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh.....ee.....hhhhhhhhhhhhhhh..hhhhh..eeeeeeehhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..eeeeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.eee........hhhhhhhhh.....eeeeeeeeeeee..........hhhh.eeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ifa A   2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGmSVQHYNPLVDAQVAEKYDLPTNWKmRAQIPFGSIEAPAGEKEFmADQERFKVFGDL 201
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   |   151       161       171       181       191       201
                                                                                                                                                                         145-MSE                  170-MSE            189-MSE

Chain B from PDB  Type:PROTEIN  Length:201
 aligned with Q8DW21_STRMU | Q8DW21 from UniProtKB/TrEMBL  Length:200

    Alignment length:201
                                                                                                                                                                                                                                200  
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191        |- 
         Q8DW21_STRMU     2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGMSVQHYNPLVDAQVAEKYDLPTNWKMRAQIPFGSIEAPAGEKEFMADQERFKVFGD--   -
               SCOP domains d2ifab_ B: Hypothetical protein Smu.260                                                                                                                                                                   SCOP domains
               CATH domains 2ifaB00 B:2-202 NADH Oxidase                                                                                                                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh.....ee.....hhhhhhhhhhhhhhhh.hhhhh..eeeeeeehhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..eeeeeeeehhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eee........hhhhhhhhhh....eeeeeeeeeeee..........hhhhheeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ifa B   2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGmSVQHYNPLVDAQVAEKYDLPTNWKmRAQIPFGSIEAPAGEKEFmADQERFKVFGDLE 202
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   |   151       161       171       181       191       201 
                                                                                                                                                                         145-MSE                  170-MSE            189-MSE

Chain C from PDB  Type:PROTEIN  Length:201
 aligned with Q8DW21_STRMU | Q8DW21 from UniProtKB/TrEMBL  Length:200

    Alignment length:201
                                                                                                                                                                                                                                200  
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191        |- 
         Q8DW21_STRMU     2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGMSVQHYNPLVDAQVAEKYDLPTNWKMRAQIPFGSIEAPAGEKEFMADQERFKVFGD--   -
               SCOP domains d2ifac_ C: Hypothetical protein Smu.260                                                                                                                                                                   SCOP domains
               CATH domains 2ifaC00 C:2-202 NADH Oxidase                                                                                                                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh.....ee.....hhhhhhhhhhhhhhh..hhhhh..eeeeeeehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..eeeeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.eee........hhhhhhhhhh....eeeeeeeeeeee..........hhhh.eeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ifa C   2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGmSVQHYNPLVDAQVAEKYDLPTNWKmRAQIPFGSIEAPAGEKEFmADQERFKVFGDLE 202
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   |   151       161       171       181       191       201 
                                                                                                                                                                         145-MSE                  170-MSE            189-MSE

Chain D from PDB  Type:PROTEIN  Length:200
 aligned with Q8DW21_STRMU | Q8DW21 from UniProtKB/TrEMBL  Length:200

    Alignment length:200
                                                                                                                                                                                                                                200 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191        |-
         Q8DW21_STRMU     2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGMSVQHYNPLVDAQVAEKYDLPTNWKMRAQIPFGSIEAPAGEKEFMADQERFKVFGD-   -
               SCOP domains d2ifad_ D: Hypothetical protein Smu.260                                                                                                                                                                  SCOP domains
               CATH domains 2ifaD00 D:2-201 NADH Oxidase                                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh.....ee.....hhhhhhhhhhhhhhh..hhhhh..eeeeeeehhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh..eeeeeeeehhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.eee........hhhhhhhhh.....eeeeeeeeeeee..........hhhh.eeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ifa D   2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGmSVQHYNPLVDAQVAEKYDLPTNWKmRAQIPFGSIEAPAGEKEFmADQERFKVFGDL 201
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   |   151       161       171       181       191       201
                                                                                                                                                                         145-MSE                  170-MSE            189-MSE

Chain E from PDB  Type:PROTEIN  Length:201
 aligned with Q8DW21_STRMU | Q8DW21 from UniProtKB/TrEMBL  Length:200

    Alignment length:201
                                                                                                                                                                                                                                200  
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191        |- 
         Q8DW21_STRMU     2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGMSVQHYNPLVDAQVAEKYDLPTNWKMRAQIPFGSIEAPAGEKEFMADQERFKVFGD--   -
               SCOP domains d2ifae_ E: Hypothetical protein Smu.260                                                                                                                                                                   SCOP domains
               CATH domains 2ifaE00 E:2-202 NADH Oxidase                                                                                                                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh.....ee.....hhhhhhhhhhhhhhhh.hhhhh..eeeeeeehhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...eeeeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..ee........hhhhhhhhh.....eeeeeeeeeeee..........hhhh.eeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ifa E   2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGmSVQHYNPLVDAQVAEKYDLPTNWKmRAQIPFGSIEAPAGEKEFmADQERFKVFGDLE 202
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   |   151       161       171       181       191       201 
                                                                                                                                                                         145-MSE                  170-MSE            189-MSE

Chain F from PDB  Type:PROTEIN  Length:199
 aligned with Q8DW21_STRMU | Q8DW21 from UniProtKB/TrEMBL  Length:200

    Alignment length:199
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191         
         Q8DW21_STRMU     2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGMSVQHYNPLVDAQVAEKYDLPTNWKMRAQIPFGSIEAPAGEKEFMADQERFKVFGD 200
               SCOP domains d2ifaf_ F: Hypothetical protein Smu.260                                                                                                                                                                 SCOP domains
               CATH domains 2ifaF00 F:2-200 NADH Oxidase                                                                                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh.....ee.....hhhhhhhhhhhhhhh..hhhhh..eeeeeeehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..eeeeeeeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.eee........hhhhhhhhh.....eeeeeeeeeeee..........hhhh.eeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ifa F   2 SNFLDLQKQRRSIYALGKTVDLSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDQAVVRNLEENFPLYAENFQPWSEQAHGIALYAIWLALAEQNIGmSVQHYNPLVDAQVAEKYDLPTNWKmRAQIPFGSIEAPAGEKEFmADQERFKVFGD 200
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   |   151       161       171       181       191         
                                                                                                                                                                         145-MSE                  170-MSE            189-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: FMN-dependent nitroreductase-like (52)

Superfamily: FMN-dependent nitroreductase-like (52)

Family: NADH oxidase/flavin reductase (29)

Protein domain: Hypothetical protein Smu.260 (1)

Streptococcus mutans [TaxId: 1309] (1)

1a	d2ifaa1	A:2-200
1b	d2ifab_	B:
1c	d2ifac_	C:
1d	d2ifad_	D:
1e	d2ifae_	E:
1f	d2ifaf_	F:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: NADH Oxidase (36)

Homologous Superfamily: NADH Oxidase (36)

Streptococcus mutans ua159. Organism_taxid: 210007. Strain: ua159. (1)

1a	2ifaB00	B:2-202
1b	2ifaC00	C:2-202
1c	2ifaE00	E:2-202
1d	2ifaA00	A:2-201
1e	2ifaD00	D:2-201
1f	2ifaF00	F:2-200

(no "Pfam Domain" information available for 2IFA)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (Q8DW21_STRMU | Q8DW21)

molecular function
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric Unit
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	Cis Peptide Bonds
		Asn A:151 - Pro A:152	[ RasMol ]
		Asn B:151 - Pro B:152	[ RasMol ]
		Asn C:151 - Pro C:152	[ RasMol ]
		Asn D:151 - Pro D:152	[ RasMol ]
		Asn E:151 - Pro E:152	[ RasMol ]
		Asn F:151 - Pro F:152	[ RasMol ]

Biological Units
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Access by PDB/NDB ID
	2ifa
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(no "Entries Sharing at Least One Protein Chain" available for 2IFA)

1yw3	THIS STRUCTURE WILL REPLACE THE EXISTING 1YW3 STRUCTURE.
smr5

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 24)

Sites (6, 6)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 6)

CATH Domains (1, 6)

Pfam Domains (0, 0)

Gene Ontology (3, 3)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File