2I7Z - JenaLib

Title :   GAAA TETRALOOP RECEPTOR COMPLEX WITH ASSOCIATED MANGANESE IONS.

Authors :   J. H. Davis, S. E. Butcher

Date :   31 Aug 06 (Deposition) - 03 Apr 07 (Release) - 28 Dec 11 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A,B  (20x)
NMR Structure *: A,B  (1x)

Keywords :   Gaaa Tetraloop, 11-Nucleotide Receptor, Rna Tertiary Structure, Ribonucleic Acid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. H. Davis, T. R. Foster, M. Tonelli, S. E. Butcher
Role Of Metal Ions In The Tetraloop-Receptor Complex As Analyzed By Nmr.
Rna V. 13 76 2007
PubMed-ID: 17119098 | Reference-DOI: 10.1261/RNA.268307

Compounds

Molecule 1 - 43-MER
	Chains	:	A, B
	Engineered	:	YES
	Other Details	:	GAAA TETRALOOP RECEPTOR RNA
	Other Details - Source	:	GAAA TETRALOOP AND 11-NT RECEPTOR SEQUENCES ARE FOUND IN GROUP I AND GROUP II INTRONS
	Synthetic	:	YES

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 10)

Sites (10, 10)

NMR Structure (10, 10)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	G A:2 , HOH A:106 , HOH A:107 , HOH A:108 , HOH A:109 , HOH A:110 , HOH A:111	BINDING SITE FOR RESIDUE MN A 101
02	AC2	SOFTWARE	HOH A:112 , HOH A:113 , HOH A:114 , HOH A:115 , HOH A:116 , HOH A:117	BINDING SITE FOR RESIDUE MN A 102
03	AC3	SOFTWARE	HOH A:118 , HOH A:119 , HOH A:120 , HOH A:121 , HOH A:122 , HOH A:123	BINDING SITE FOR RESIDUE MN A 103
04	AC4	SOFTWARE	HOH A:124 , HOH A:125 , HOH A:126 , HOH A:127 , HOH A:128 , HOH A:129	BINDING SITE FOR RESIDUE MN A 104
05	AC5	SOFTWARE	G A:19 , HOH A:130 , HOH A:131 , HOH A:132 , HOH A:133 , HOH A:134 , HOH A:135	BINDING SITE FOR RESIDUE MN A 105
06	AC6	SOFTWARE	G B:45 , HOH B:111 , HOH B:112 , HOH B:113 , HOH B:114 , HOH B:115 , HOH B:116	BINDING SITE FOR RESIDUE MN B 106
07	AC7	SOFTWARE	HOH B:117 , HOH B:118 , HOH B:119 , HOH B:120 , HOH B:121 , HOH B:122	BINDING SITE FOR RESIDUE MN B 107
08	AC8	SOFTWARE	HOH B:123 , HOH B:124 , HOH B:125 , HOH B:126 , HOH B:127 , HOH B:128	BINDING SITE FOR RESIDUE MN B 108
09	AC9	SOFTWARE	HOH B:129 , HOH B:130 , HOH B:131 , HOH B:132 , HOH B:133 , HOH B:134	BINDING SITE FOR RESIDUE MN B 109
10	BC1	SOFTWARE	G B:61 , G B:62 , HOH B:135 , HOH B:136 , HOH B:137 , HOH B:138 , HOH B:139 , HOH B:140	BINDING SITE FOR RESIDUE MN B 110

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

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Chain A from PDB  Type:RNA  Length:43
                                                                          
                  2i7z A  1 GGGAUAUGGAAGAACCGGGGAAACUUGGUUCUUCCUAAGUCCU 43
                                    10        20        30        40

Chain B from PDB  Type:RNA  Length:43
                                                                          
                  2i7z B 44 GGGAUAUGGAAGAACCGGGGAAACUUGGUUCUUCCUAAGUCCU 86
                                    53        63        73        83

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Classification and Annotation

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