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(-) Description

Title :  CRYSTAL STRUCTURE OF AN 8 REPEAT CONSENSUS TPR SUPERHELIX (ORTHOROMBIC CRYSTAL FORM)
 
Authors :  T. Kajander, A. L. Cortajarena, L. Regan
Date :  08 Aug 06  (Deposition) - 19 Feb 08  (Release) - 22 Sep 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Tpr, Tetratricopeptide, Protein Design, Protein Stability, Superhelix, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Kajander, A. L. Cortajarena, S. Mochrie, L. Regan
Structure And Stability Of Designed Tpr Protein Superhelices: Unusual Crystal Packing And Implications For Natural Tpr Proteins.
Acta Crystallogr. , Sect. D V. 63 800 2007
PubMed-ID: 17582171  |  Reference-DOI: 10.1107/S0907444907024353
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - SYNTHETIC CONSENSUS TPR PROTEIN
    Chains: A
    Engineered: YES
    Other Details: THE SEQUENCE OF THE PROTEIN WAS DESIGNED AND THEN EXPRESSED IN E.COLI BL21(DE3), PLASMID PPRO-XHTA
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1SM3Ligand/IonSAMARIUM (III) ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1SM-1Ligand/IonSAMARIUM (III) ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:56 , ASP A:120 , GLU A:121 , HOH A:729BINDING SITE FOR RESIDUE SM A 706
2AC2SOFTWAREASP A:18 , GLU A:19 , LEU A:98 , HOH A:731 , HOH A:732 , HOH A:733BINDING SITE FOR RESIDUE SM A 707
3AC3SOFTWAREASP A:52 , GLU A:53 , ASP A:86 , GLN A:116 , HOH A:730BINDING SITE FOR RESIDUE SM A 708

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2HYZ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2HYZ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2HYZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2HYZ)

(-) Exons   (0, 0)

(no "Exon" information available for 2HYZ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:136
                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2hyzA00 A:1-136  [code=1.25.40.10, no name defined]                                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2hyz A   1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136
                                    10        20        30        40        50        60        70        80        90       100       110       120       130
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2HYZ)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2HYZ)

(-) Gene Ontology  (0, 0)

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  2hyz
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(-) Related Entries Specified in the PDB File

2avp 2fo7