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(-) Description

Title :  X-RAY CRYSTAL STRUCTURE OF PROTEIN AGR_C_4470 FROM AGROBACTERIUM TUMEFACIENS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ATR92.
 
Authors :  S. M. Vorobiev, H. Neely, J. Seetharaman, L. Zhao, K. Cunningham, L. C. Ma, Y. Fang, R. Xiao, T. Acton, T. G. Montelione, J. F. Hunt, L. Tong Northeast Structural Genomics Consortium (Nesg)
Date :  19 Jul 06  (Deposition) - 19 Sep 06  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Nesg, Atr92, Agr_c_4470, Q7Cx01_agrt5, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Vorobiev, H. Neely, J. Seetharaman, L. C. Ma, R. Xiao, T. B. Acton, G. T. Montelione, L. Tong
Crystal Structure Of Agr_c_4470P From Agrobacterium Tumefaciens.
Protein Sci. V. 16 535 2007
PubMed-ID: 17322535  |  Reference-DOI: 10.1110/PS.062663307
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - AGR_C_4470P
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3) + MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: AGR_C_4470
    Mutation: YES
    Organism Scientific: AGROBACTERIUM TUMEFACIENS STR. C58
    Organism Taxid: 176299
    Strain: C58-ATCC 33970

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric Unit (1, 5)
No.NameCountTypeFull Name
1MSE5Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 10)
No.NameCountTypeFull Name
1MSE10Mod. Amino AcidSELENOMETHIONINE

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:172
 aligned with Q7CX01_AGRFC | Q7CX01 from UniProtKB/TrEMBL  Length:174

    Alignment length:176
                               1                                                                                                                                                                            
                               |     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167      
         Q7CX01_AGRFC     - ---MSIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFDAIWNEMRGWGEILMIVQTGDIVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAITFVDRGFHGRRSCSVWFMNAAGGAMFKIFVRRDENKELLAGQLAKFEELRDGFR 173
               SCOP domains d2hqva1 A:11-186 Hypothetic    al protein AGR_C_4470p                                                                                                                            SCOP domains
               CATH domains 2hqvA00 A:11-186 HemS/ChuS/    ChuX like domains                                                                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhh....----.........hhhhhhh......eeeee..hhhhhhhhhh....eeeeee....eeeeee....eeee..eeee.......eeehhh.eeeeeeeeeee..eeeeeeeeee....eeeeee.........hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2hqv A  11 AYPmSIAAQKNDDDRQARALAALAEKP----EAIAAKAEVAPAEILAILPQGAAVSAPADRFDAIWNEmRGWGEILmIVQTGDIVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAITFVDRGFHGRRSCSVWFmNAAGGAmFKIFVRRDENKELLAGQLAKFEELRDGFR 186
                               |    20        30      |  - |      50        60        70        80      | 90       100       110       120       130       140       150      |160       170       180      
                               |                     37   42                                   79-MSE  87-MSE                                                        150-MSE  |                             
                              14-MSE                                                                                                                                        157-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Multi-domain proteins (alpha and beta) (2421)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

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