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(-) Description

Title :  NMR STRUCTURE OF CASSIICOLIN
 
Authors :  P. Barthe, V. Pujade-Renault, C. Roumestand, F. De Lamotte
Date :  27 Jun 06  (Deposition) - 27 Feb 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Toxin, Disulfide Bridge, Glycoprotein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Barthe, V. Pujade-Renaud, F. Breton, D. Gargani, R. Thai, C. Roumestand, F. De Lamotte
Structural Analysis Of Cassiicolin, A Host-Selective Protein Toxin From Corynespora Cassiicola
J. Mol. Biol. V. 367 89 2007
PubMed-ID: 17234212  |  Reference-DOI: 10.1016/J.JMB.2006.11.086
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CASSIICOLIN
    Chains: A
    Engineered: YES
    Expression System: CORYNESPORA CASSIICOLA
    Expression System Taxid: 59586
    Organism Scientific: CORYNESPORA CASSIICOLA
    Organism Taxid: 59586

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

NMR Structure (2, 2)
No.NameCountTypeFull Name
13HD1Ligand/Ion3-O-METHYL-O-ALPHA-D-MANNOPYRANOSYL
2PCA1Mod. Amino AcidPYROGLUTAMIC ACID

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:2BINDING SITE FOR RESIDUE 3HD A 28

(-) SS Bonds  (3, 3)

NMR Structure
No.Residues
1A:3 -A:18
2A:6 -A:27
3A:14 -A:24

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2HGO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2HGO)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:27
 aligned with CASSI_CORCC | P84902 from UniProtKB/Swiss-Prot  Length:27

    Alignment length:27
                                    10        20       
           CASSI_CORCC    1 QTCVSCVNFGNGFCGDNCGNSWACSGC 27
               SCOP domains --------------------------- SCOP domains
               CATH domains --------------------------- CATH domains
               Pfam domains --------------------------- Pfam domains
         Sec.struct. author ......eee...eee.....eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------- SAPs(SNPs)
                    PROSITE --------------------------- PROSITE
                 Transcript --------------------------- Transcript
                  2hgo A  1 xTCVSCVNFGNGFCGDNCGNSWACSGC 27
                            |       10        20       
                            |                          
                            1-PCA
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2HGO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2HGO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2HGO)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (CASSI_CORCC | P84902)
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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