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Asym./Biol. Unit - manually (Jmol Viewer)

Asym./Biol. Unit (Jmol Viewer)

Title :   ENTEROBACTIN AND SALMOCHELIN HYDROLASE IROE

Authors :   N. A. Larsen, C. T. Walsh

Date :   11 May 06 (Deposition) - 05 Sep 06 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym./Biol. Unit : A

Keywords :   Serine Hydrolase, Catalytic Dyad, Enterobactin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   N. A. Larsen, H. Lin, R. Wei, M. A. Fischbach, C. T. Walsh
Structural Characterization Of Enterobactin Hydrolase Iroe.
Biochemistry V. 45 10184 2006
PubMed-ID: 16922493 | Reference-DOI: 10.1021/BI060950I
(for further references see the PDB file header)

Molecule 1 - IROE PROTEIN
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Gene	:	IROE
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562

		1
Asymmetric/Biological Unit	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (1, 4)

No.	Name	Count	Type	Full Name
1	MSE	4	Mod. Amino Acid	SELENOMETHIONINE

(no "Site" information available for 2GZR)

(no "SS Bond" information available for 2GZR)

(no "Cis Peptide Bond" information available for 2GZR)

(no "SAP(SNP)/Variant" information available for 2GZR)

(no "PROSITE Motif" information available for 2GZR)

(no "Exon" information available for 2GZR)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:PROTEIN  Length:242
 aligned with Q6KD95_ECOLX | Q6KD95 from UniProtKB/TrEMBL  Length:318

    Alignment length:265
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     
         Q6KD95_ECOLX    41 PNIADKGSVFYHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSSSYFRSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFNASFRQALLDISGE 305
               SCOP domains d2gzra1 A:41-305 Enterobactin and salmochelin hydrolase IroE                                                                                                                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh...eeeeeeeee......eeeeeeeee........eeeeee.hhhhhhhhhhhhhhhhhhh....eeeeeee......hhhhhhhhh.....------------....hhhhhhhhhhhhhhhhhh....eeeeeeeeeeehhhhhhhhhhhhhh....eeeee.......hhhhhhhhhh..hhhhh..eeeeee...-----------hhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gzr A  41 PNIADKGSVFYHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYmLDGNAVmDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAE------------RKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSSSYFRSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAImEGSA-----------GVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPmFNASFRQALLDISGE 305
                                    50        60        70        80       |90    |  100       110       120       130        |-         - |     160       170       180       190       200       210       220       230       240 |   |   -       260       270       280       290       300     
                                                                          88-MSE 95-MSE                                     139          152                                                                                       242-MSE         258                             290-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

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Superfamilies( (-)

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Class: Alpha and beta proteins (a/b) (23833)

Fold: alpha/beta-Hydrolases (971)

Superfamily: alpha/beta-Hydrolases (971)

Family: IroE-like (2)

Protein domain: Enterobactin and salmochelin hydrolase IroE (2)

Escherichia coli [TaxId: 562] (2)

d2gzra1

A:41-305

(no "CATH Domain" information available for 2GZR)

(no "Pfam Domain" information available for 2GZR)

Asymmetric/Biological Unit(hide GO term definitions)

(no "Gene Ontology" information available for 2GZR)

Asymmetric/Biological Unit
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Description

Compounds

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Ligands, Modified Residues, Ions (1, 4)

Sites (0, 0)

SS Bonds (0, 0)

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