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(-) Description

Title :  THE 2.6A STRUCTURE OF INFECTIOUS BURSAL VIRUS DERIVED T=1 PARTICLES
 
Authors :  D. Garriga, J. Querol-Audi, F. Abaitua, I. Saugar, J. Pous, N. Verdague J. R. Caston, J. F. Rodriguez
Date :  27 Apr 06  (Deposition) - 18 Jul 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T  (3x)
Keywords :  Virus-Like Capsid (Protein-Protein Complex), Icosahedral Virus, Virus (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Garriga, J. Querol-Audi, F. Abaitua, I. Saugar, J. Pous, N. Verdaguer, J. R. Caston, J. F. Rodriguez
The 2. 6-Angstrom Structure Of Infectious Bursal Disease Virus-Derived T=1 Particles Reveals New Stabilizing Element Of The Virus Capsid.
J. Virol. V. 80 6895 2006
PubMed-ID: 16809295  |  Reference-DOI: 10.1128/JVI.00368-06

(-) Compounds

Molecule 1 - POLYPROTEIN
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Common: BAKER'S YEAST
    Expression System Plasmid: PESC-URA
    Expression System Strain: YPH499
    Expression System Taxid: 4932
    Expression System Vector Type: PLASMID
    Fragment: CAPSID PROTEIN VP2
    Organism Common: GUMBORO VIRUS
    Organism Scientific: INFECTIOUS BURSAL DISEASE VIRUS
    Organism Taxid: 10995
    Strain: SOROA
    Synonym: PP, VP2

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric Unit : ABCDEFGHIJKLMNOPQRST
Biological Unit 1 (3x): ABCDEFGHIJKLMNOPQRST

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 11)

Asymmetric Unit (1, 11)
No.NameCountTypeFull Name
1CA11Ligand/IonCALCIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:31 , ASP A:174 , ASP E:31 , ASP E:174 , ASP L:31 , ASP L:174BINDING SITE FOR RESIDUE CA A 501
02AC2SOFTWAREASP B:31 , ASP B:174 , ASP C:31 , ASP C:174 , ASP J:31 , ASP J:174BINDING SITE FOR RESIDUE CA B 502
03AC3SOFTWAREASP B:31 , ASP B:174 , ASP C:31 , ASP C:174 , ASP J:31 , ASP J:174BINDING SITE FOR RESIDUE CA C 503
04AC4SOFTWAREASP D:31 , ASP D:174BINDING SITE FOR RESIDUE CA D 504
05AC5SOFTWAREASP F:31 , ASP F:174 , ASP I:31 , ASP I:174 , ASP K:31 , ASP K:174BINDING SITE FOR RESIDUE CA F 505
06AC6SOFTWAREASP G:31 , ASP G:174 , ASP H:31 , ASP H:174 , ASP N:31 , ASP N:174BINDING SITE FOR RESIDUE CA G 506
07AC7SOFTWAREASP A:31 , ASP A:174 , ASP E:31 , ASP E:174 , ASP L:31 , ASP L:174BINDING SITE FOR RESIDUE CA L 507
08AC8SOFTWAREASP M:31 , ASP M:174 , ASP R:31 , ASP R:174 , ASP S:31 , ASP S:174BINDING SITE FOR RESIDUE CA M 508
09AC9SOFTWAREASP O:31 , ASP O:174 , ASP P:31 , ASP P:174 , ASP Q:31 , ASP Q:174BINDING SITE FOR RESIDUE CA O 509
10BC1SOFTWAREASP M:31 , ASP M:174 , ASP R:31 , ASP R:174 , ASP S:31 , ASP S:174BINDING SITE FOR RESIDUE CA S 510
11BC2SOFTWAREASP T:31 , ASP T:174BINDING SITE FOR RESIDUE CA T 511

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2GSY)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2GSY)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (10, 200)

Asymmetric Unit (10, 200)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_POLS_IBDV_001 *Y80LPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TY80L
02UniProtVAR_POLS_IBDV_002 *H253QPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TH253Q
03UniProtVAR_POLS_IBDV_003 *L263FPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TL263F
04UniProtVAR_POLS_IBDV_004 *A270TPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TT270T
05UniProtVAR_POLS_IBDV_005 *N279DPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TN279D
06UniProtVAR_POLS_IBDV_006 *T284APOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TT284A
07UniProtVAR_POLS_IBDV_007 *L290MPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TM290M
08UniProtVAR_POLS_IBDV_008 *I312VPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TI312V
09UniProtVAR_POLS_IBDV_009 *R330SPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TR330S
10UniProtVAR_POLS_IBDV_010 *G409APOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TG409A
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (10, 600)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_POLS_IBDV_001 *Y80LPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TY80L
02UniProtVAR_POLS_IBDV_002 *H253QPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TH253Q
03UniProtVAR_POLS_IBDV_003 *L263FPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TL263F
04UniProtVAR_POLS_IBDV_004 *A270TPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TT270T
05UniProtVAR_POLS_IBDV_005 *N279DPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TN279D
06UniProtVAR_POLS_IBDV_006 *T284APOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TT284A
07UniProtVAR_POLS_IBDV_007 *L290MPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TM290M
08UniProtVAR_POLS_IBDV_008 *I312VPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TI312V
09UniProtVAR_POLS_IBDV_009 *R330SPOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TR330S
10UniProtVAR_POLS_IBDV_010 *G409APOLS_IBDV  ---  ---A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/TG409A
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2GSY)

(-) Exons   (0, 0)

(no "Exon" information available for 2GSY)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsya1 A:8-440 Birnavirus VP2                                                                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee............ee......eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy A   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyb_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee............ee......eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy B   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain C from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyc_ C: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee............ee......eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy C   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain D from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyd_ D: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeeeee..-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee............ee......eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy D   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain E from PDB  Type:PROTEIN  Length:433
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsye_ E: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee............eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeee.........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy E   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   


Chain F from PDB  Type:PROTEIN  Length:433
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyf_ F: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee............eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy F   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   


Chain G from PDB  Type:PROTEIN  Length:433
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyg_ G: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee........ee..eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy G   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   


Chain H from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyh_ H: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy H   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain I from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyi_ I: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy I   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain J from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyj_ J: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy J   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain K from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyk_ K: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy K   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain L from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyl_ L: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee............ee......eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy L   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain M from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsym_ M: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee............ee......eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee..........eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy M   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain N from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyn_ N: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy N   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain O from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyo_ O: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy O   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain P from PDB  Type:PROTEIN  Length:430
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyp_ P: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeeeee...---....eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy P   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPG---ALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107       | - |     127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                     115 119                                                                                                                                                                                                                                                                                                                                 


Chain Q from PDB  Type:PROTEIN  Length:429
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyq_ Q: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee.....----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy Q   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPG----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107       | -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                     115  120                                                                                                                                                                                                                                                                                                                                


Chain R from PDB  Type:PROTEIN  Length:433
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyr_ R: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee..ee........eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee..eee.....eeeee.....eeeeeeeeeeeeeeee.....eeeeeeee.......eeeeeeeeeee....eeeeeeeeeee....eeeeeeeeeeeee.....eeeeeeeeehhhhh...eeeeeeeeeeee.......eeeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy R   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   


Chain S from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsys_ S: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee............ee......eeeeeeeeeeeeeee.......eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy S   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120                                                                                                                                                                                                                                                                                                                                


Chain T from PDB  Type:PROTEIN  Length:428
 aligned with POLS_IBDV | P61825 from UniProtKB/Swiss-Prot  Length:1012

    Alignment length:433
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
            POLS_IBDV     8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFQTSVHGLVLGATIYLIGFDGTAVITRAVAANNGLTTGTDNLLPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
               SCOP domains d2gsyt_ T: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh............eeeeeeeeeeee......eeeee.......eeeeeeee.....eeeeeeee...hhhh.eeeeeeeeeeeeeee....-----...eeeeeee..hhhhh.....hhhhhh..hhh.eeeeee....eeee..........ee..ee............ee......eeeeeeeeeeeeeee......eeeeeeeeeeee...eeeeeeeeee.....eeeeeeeeeee....eeeeeeee...ee.....eeeeeeeeehhhhh...eeeeeeeeeeee........eeeeeeeeeeeee...........eeeeeee......eeeeeeeeeeeeee..hhhhh..........hhhhhhhhhhhhhhhhh...eeehhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q---------F------T--------D----A-----M---------------------V-----------------S------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gsy T   8 TQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQGNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLP-----LNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQPGGVTITLFSANIDAITSLSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSARGSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAG 440
                                    17        27        37        47        57        67        77        87        97       107      |  -  |    127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437   
                                                                                                                                    114   120
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 20)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2GSY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2GSY)

(-) Gene Ontology  (10, 10)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T   (POLS_IBDV | P61825)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0008236    serine-type peptidase activity    Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0005198    structural molecule activity    The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell.
biological process
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
    GO:0039621    T=13 icosahedral viral capsid    The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=13 symmetry. The T=13 capsid is composed of 12 pentameric and 120 hexameric capsomeres.
    GO:0030430    host cell cytoplasm    The cytoplasm of a host cell.
    GO:0019028    viral capsid    The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.

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        POLS_IBDV | P61825: 2imu 3fbm

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