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(-) Description

Title :  CRYSTAL STRUCTURE OF THE BIOTIN CARBOXYLASE SUBUNIT, F363A MUTANT, OF ACETYL-COA CARBOXYLASE FROM ESCHERICHIA COLI.
 
Authors :  Y. Shen, C. Y. Chou, G. G. Chang, L. Tong
Date :  18 Apr 06  (Deposition) - 04 Jul 06  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Atp-Grasp, Carboxylase, Biotin-Dependent, Fatty Acid Synthesis, Dimer-Interface Mutant, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Shen, C. Y. Chou, G. G. Chang, L. Tong
Is Dimerization Required For The Catalytic Activity Of Bacterial Biotin Carboxylase?
Mol. Cell V. 22 807 2006
PubMed-ID: 16793549  |  Reference-DOI: 10.1016/J.MOLCEL.2006.04.026
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BIOTIN CARBOXYLASE
    Chains: A, B, C, D
    EC Number: 6.3.4.14
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21/DE3 ROSETTA
    Expression System Taxid: 562
    Expression System Vector: PET28A
    Expression System Vector Type: PLASMID
    Gene: ACCC
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: A SUBUNIT OF ACETYL-COA CARBOXYLASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2GPW)

(-) Sites  (0, 0)

(no "Site" information available for 2GPW)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2GPW)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Tyr A:154 -Pro A:155
2Ala A:243 -Pro A:244
3Tyr B:154 -Pro B:155
4Ala B:243 -Pro B:244
5Tyr C:154 -Pro C:155
6Ala C:243 -Pro C:244
7Tyr D:154 -Pro D:155
8Ala D:243 -Pro D:244

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2GPW)

(-) PROSITE Motifs  (3, 12)

Asymmetric Unit (3, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BCPS50979 Biotin carboxylation domain profile.ACCC_ECOLI1-445
 
 
 		  4A:1-445
B:1-445
C:1-445
D:1-445
2CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.ACCC_ECOLI154-168
 
 
 		  4A:154-163
B:154-168
C:154-168
D:154-168
3CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.ACCC_ECOLI286-293
 
 
 		  4A:286-293
B:286-293
C:286-293
D:286-293
Biological Unit 1 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BCPS50979 Biotin carboxylation domain profile.ACCC_ECOLI1-445
 
 
 		  1A:1-445
-
-
-
2CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.ACCC_ECOLI154-168
 
 
 		  1A:154-163
-
-
-
3CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.ACCC_ECOLI286-293
 
 
 		  1A:286-293
-
-
-
Biological Unit 2 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BCPS50979 Biotin carboxylation domain profile.ACCC_ECOLI1-445
 
 
 		  1-
B:1-445
-
-
2CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.ACCC_ECOLI154-168
 
 
 		  1-
B:154-168
-
-
3CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.ACCC_ECOLI286-293
 
 
 		  1-
B:286-293
-
-
Biological Unit 3 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BCPS50979 Biotin carboxylation domain profile.ACCC_ECOLI1-445
 
 
 		  1-
-
C:1-445
-
2CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.ACCC_ECOLI154-168
 
 
 		  1-
-
C:154-168
-
3CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.ACCC_ECOLI286-293
 
 
 		  1-
-
C:286-293
-
Biological Unit 4 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BCPS50979 Biotin carboxylation domain profile.ACCC_ECOLI1-445
 
 
 		  1-
-
-
D:1-445
2CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.ACCC_ECOLI154-168
 
 
 		  1-
-
-
D:154-168
3CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.ACCC_ECOLI286-293
 
 
 		  1-
-
-
D:286-293

(-) Exons   (0, 0)

(no "Exon" information available for 2GPW)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:445
 aligned with ACCC_ECOLI | P24182 from UniProtKB/Swiss-Prot  Length:449

    Alignment length:451
                                1                                                                                                                                                                                                                                                                                                                                                                                                                                                              
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446 
           ACCC_ECOLI     - ----MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
               SCOP domains d2gpwa2 A:-3-114 Biotin carboxylase (BC), N-terminal domain                                                           d2gpwa3 A:115-330 Biotin carboxylase (BC), domain      2                                                                                                                                                                d2gpwa1 A:331-447 Biotin carboxylase (BC), C-domain                                                                   SCOP domains
               CATH domains ----2gpwA01 A:1-85  [code=3.40.50.20, no name defined]                                   2gpwA02 A:86-130,A:204-444                   2gpwA03 A:131-203 ATP-grasp fold,      A domain                          2gpwA02 A:86-130,A:204-444 ATP-grasp fold, B domain                                                                                                                                                                                              --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee..hhhhhhhhhhhhhhh..eeeeeee.............eeeeee..hhhhh..hhhhhhhhhhhh...eee........hhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhh..eeeee...-----.eee....hhhhhhhhhhhhhhhhh-...eeeee.....eeeeeeeeee....eeeeeeeeeeeee..eeeeeee.....hhhhhhhhhhhhhhhhhhh..eeeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhh......hhhhh....eeeeeeee...........ee..eee......eeee.......ee......eeeeeeeee.hhhhhhhhhhhhhhhheee....hhhhhhhhhhhhhhhhh....hhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----BC  PDB: A:1-445 UniProt: 1-445                                                                                                                                                                                                                                                                                                                                                                                                                              -- PROSITE (1)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ---------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gpw A  -3 RGSHMLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGG-----MRVVRGDAELAQSISMTRAEAKAAF-NDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGAGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
                                     6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156      |  -  |    176       186      |196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446 
                                                                                                                                                                                                163   169                     193 |                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                                195                                                                                                                                                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:442
 aligned with ACCC_ECOLI | P24182 from UniProtKB/Swiss-Prot  Length:449

    Alignment length:451
                                1                                                                                                                                                                                                                                                                                                                                                                                                                                                              
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446 
           ACCC_ECOLI     - ----MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
               SCOP domains d2gpwb2 B:-3-114 Biotin carboxylase (BC), N-terminal domain                                                           d2gpwb3 B:115-330 Biotin carboxylase (BC), domai     n 2                                                                                                                                                                d2gpwb1 B:331-447 Biotin carboxylase (BC), C-domain                                                                   SCOP domains
               CATH domains ----2gpwB01 B:1-85  [code=3.40.50.20, no name defined]                                   2gpwB02 B:86-130,B:204-444                   2gpwB03 B:131-203 ATP-grasp fold     , A domain                          2gpwB02 B:86-130,B:204-444 ATP-grasp fold, B domain                                                                                                                                                                                              --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee..hhhhhhhhhhhhhhhh.eeeeeee.hhh.hhhhhhh.eeeeee..hhhhh..hhhhhhhhhhhhh..eee........hhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhh..eeeee..-----.eeee.hhhhhhhhhhhhhhhhh.----..eeeee.....eeeeeeeeee....eeeeeeeeeeeee..eeeeeee.....hhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhh......hhhhh....eeeeeeee...........ee...ee......eeeee......ee......eeeeeeeee.hhhhhhhhhhhhhhhhee.....hhhhhhhhhhhhhhhhh....hhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----BC  PDB: B:1-445 UniProt: 1-445                                                                                                                                                                                                                                                                                                                                                                                                                              -- PROSITE (1)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ---------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gpw B  -3 RGSHMLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASG-----GMRVVRGDAELAQSISMTRAEAKA----DMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGAGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
                                     6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156     |   - |     176       186    |  196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446 
                                                                                                                                                                                               162   168                    191  196                                                                                                                                                                                                                                                           


Chain C from PDB  Type:PROTEIN  Length:446
 aligned with ACCC_ECOLI | P24182 from UniProtKB/Swiss-Prot  Length:449

    Alignment length:451
                                1                                                                                                                                                                                                                                                                                                                                                                                                                                                              
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446 
           ACCC_ECOLI     - ----MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
               SCOP domains d2gpwc2 C:-3-114 Biotin carboxylase (BC), N-terminal domain                                                           d2gpwc3 C:115-330 Biotin carboxylase (BC), domai     n 2                                                                                                                                                                d2gpwc1 C:331-447 Biotin carboxylase (BC), C-domain                                                                   SCOP domains
               CATH domains ----2gpwC01 C:1-85  [code=3.40.50.20, no name defined]                                   2gpwC02 C:86-130,C:204-444                   2gpwC03 C:131-203 ATP-grasp fold     , A domain                          2gpwC02 C:86-130,C:204-444 ATP-grasp fold, B domain                                                                                                                                                                                              --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee..hhhhhhhhhhhhhhh..eeeeeehhhhh.hhhhhhh.eeee....hhhhh..hhhhhhhhhhhhh..eee........hhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhh..eeeee..-----..eee.hhhhhhhhhhhhhhhhhhhhh...eeeee.....eeeeeeeeee....eeeeeeeeeeeee..eeeeeee.....hhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhh......hhhhh....eeeeeeee...........ee..eee......eeeee......ee......eeeeeeeee.hhhhhhhhhhhhhhhheee....hhhhhhhhhhhhhhhhh....hhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----BC  PDB: C:1-445 UniProt: 1-445                                                                                                                                                                                                                                                                                                                                                                                                                              -- PROSITE (1)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ---------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gpw C  -3 RGSHMLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASG-----GMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGAGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
                                     6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156     |   - |     176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446 
                                                                                                                                                                                               162   168                                                                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:447
 aligned with ACCC_ECOLI | P24182 from UniProtKB/Swiss-Prot  Length:449

    Alignment length:452
                                 1                                                                                                                                                                                                                                                                                                                                                                                                                                                              
                                 |   5        15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445  
           ACCC_ECOLI     - -----MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
               SCOP domains d2gpwd2 D:-4-114 Biotin carboxylase (BC), N-terminal domain                                                            d2gpwd3 D:115-330 Biotin carboxylase (BC), domai     n 2                                                                                                                                                                d2gpwd1 D:331-447 Biotin carboxylase (BC), C-domain                                                                   SCOP domains
               CATH domains -----2gpwD01 D:1-85  [code=3.40.50.20, no name defined]                                   2gpwD02 D:86-130,D:204-444                   2gpwD03 D:131-203 ATP-grasp fold     , A domain                          2gpwD02 D:86-130,D:204-444 ATP-grasp fold, B domain                                                                                                                                                                                              --- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee..hhhhhhhhhhhhhhh..eeeeeee.hhh.hhhhhhh.eeeeee..hhhhh..hhhhhhhhhhhhh..eee........hhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhh..eeeee..-----..eee.hhhhhhhhhhhhhhhhhhhh....eeeee.....eeeeeeeeee....eeeeeeeeeeeee..eeeeeee.....hhhhhhhhhhhhhhhhhhh..eeeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhh......hhhhh....eeeeeeee...........ee..eee......eeeee......ee......eeeeeeeee.hhhhhhhhhhhhhhhheee....hhhhhhhhhhhhhhhhh....hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----BC  PDB: D:1-445 UniProt: 1-445                                                                                                                                                                                                                                                                                                                                                                                                                              -- PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ---------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2gpw D  -4 PRGSHMLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASG-----GMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGAGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
                                     5        15        25        35        45        55        65        75        85        95       105       115       125       135       145       155      |  -  |    175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445  
                                                                                                                                                                                                162   168
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 12)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2GPW)

(-) Gene Ontology  (15, 15)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (ACCC_ECOLI | P24182)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0003989    acetyl-CoA carboxylase activity    Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.
    GO:0004075    biotin carboxylase activity    Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0006633    fatty acid biosynthetic process    The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
    GO:0006631    fatty acid metabolic process    The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:2001295    malonyl-CoA biosynthetic process    The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.
    GO:0045717    negative regulation of fatty acid biosynthetic process    Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACCC_ECOLI | P24182: 1bnc 1dv1 1dv2 1k69 2gps 2j9g 2v58 2v59 2v5a 2vr1 2w6m 2w6n 2w6o 2w6p 2w6q 2w6z 2w70 2w71 3g8c 3g8d 3jzf 3jzi 3rup 3rv3 3rv4 4hr7

(-) Related Entries Specified in the PDB File

1bnc 1dv1 1dv2 1w93 1w96