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(-) Description

Title :  CRYSTAL STRUCTURE OF YQJZ_BACSU FROM BACILLUS SUBTILIS. NORTHEAST STRUCTURAL GENOMICS TARGET SR435
 
Authors :  J. Benach, M. Su, S. Jayaraman, Y. Fang, R. Xiao, L. -C. Ma, K. Cunningham T. B. Acton, G. T. Montelione, L. Tong, J. F. Hunt, Northeast Structur Genomics Consortium (Nesg)
Date :  12 Apr 06  (Deposition) - 25 Apr 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Sr435, Protein Structure, Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Benach, M. Su, S. Jayaraman, Y. Fang, R. Xiao, L. -C. Ma, K. Cunningham, D. Wang, T. B. Acton, G. T. Montelione, L. Tong, J. F. Hun
Crystal Structure Of Yqjz_bacsu From Bacillus Subtilis. Northeast Structural Genomics Target Sr435
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN YQJZ
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)+ MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: YQJZ
    Organism Scientific: BACILLUS SUBTILIS
    Organism Taxid: 1423

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Pro A:11 -Pro A:12

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (1, 1)

Asymmetric Unit (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABMPS51725 ABM domain profile.YQJZ_BACSU13-99  1A:13-99
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABMPS51725 ABM domain profile.YQJZ_BACSU13-99  2A:13-99

(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:89
 aligned with YQJZ_BACSU | P54563 from UniProtKB/Swiss-Prot  Length:114

    Alignment length:108
                                    12        22        32        42        52        62        72        82        92       102        
           YQJZ_BACSU     3 DFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGITVSYWDSMDAINHWRHHTEHQAAKEKGRSVWYESYAVRVAKVDRQRLFQE 110
               SCOP domains d2go8a1 A:3-110 Hypot      hetical protein YqjZ                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........eeeeeeeee..------hhhhhhhhhhhhhh..eeeeeeee....eeeeeeee.hhhhhhhhhhhh-------------..eeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------ABM  PDB: A:13-99 UniProt: 13-99                                                       ----------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 2go8 A   3 DFLSKTPEPPYYAVIFSSVKS------GETAERmVSLAADQPGFLGVESVREADGRGITVSYWDSmDAINHWRHHT-------------YESYAVRVAKVDRQRLFQE 110
                                    12        22|      |32   |    42        52        62     |  72     |   -        92       102        
                                               23     30     |                              68-MSE    78            92                  
                                                            36-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2GO8)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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  YQJZ_BACSU | P54563
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