2GHW - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF SARS SPIKE PROTEIN RECEPTOR BINDING DOMAIN IN COMPLEX WITH A NEUTRALIZING ANTIBODY, 80R

Authors :   W. C. Hwang, Y. Lin, E. Santelli, J. Sui, L. Jaroszewski, B. Stec, M. Farzan, W. A. Marasco, R. C. Liddington

Date :   27 Mar 06 (Deposition) - 19 Sep 06 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Sars, S Protein, Neutralizing Antibody, Virus/Viral Protein/Antibiotic Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   W. C. Hwang, Y. Lin, E. Santelli, J. Sui, L. Jaroszewski, B. Stec, M. Farzan, W. A. Marasco, R. C. Liddington
Structural Basis Of Neutralization By A Human Anti-Severe Acute Respiratory Syndrome Spike Protein Antibody, 80R.
J. Biol. Chem. V. 281 34610 2006
PubMed-ID: 16954221 | Reference-DOI: 10.1074/JBC.M603275200
(for further references see the PDB file header)

Molecule 1 - SPIKE GLYCOPROTEIN
	Chains	:	A, C
	Engineered	:	YES
	Expression System	:	SPODOPTERA FRUGIPERDA
	Expression System Common	:	FALL ARMYWORM
	Expression System Plasmid	:	PACGP67A
	Expression System Taxid	:	7108
	Expression System Vector Type	:	PLASMID
	Fragment	:	RBD OF SPIKE PROTEIN S1 (318-510)
	Gene	:	S
	Organism Scientific	:	SARS CORONAVIRUS
	Organism Taxid	:	227859
	Synonym	:	PEPLOMER PROTEIN, E2, RBD

Molecule 2 - ANTI-SARS SCFV ANTIBODY, 80R
	Chains	:	B, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET22B
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 5)

No.	Name	Count	Type	Full Name
1	CL	5	Ligand/Ion	CHLORIDE ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION

Asymmetric Unit (5, 5)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	HOH D:291	BINDING SITE FOR RESIDUE CL C 20
2	AC2	SOFTWARE	GLY A:488 , TYR A:491 , HOH A:545 , SER B:31 , TYR B:32 , HOH B:411	BINDING SITE FOR RESIDUE CL A 88
3	AC3	SOFTWARE	HOH C:517 , HOH C:536 , HOH C:566	BINDING SITE FOR RESIDUE CL A 142
4	AC4	SOFTWARE	TYR A:491 , HOH A:596 , ARG B:100	BINDING SITE FOR RESIDUE CL A 246
5	AC5	SOFTWARE	HOH A:563 , HOH A:567 , HOH A:577 , HOH A:595 , HOH B:399	BINDING SITE FOR RESIDUE CL A 517

Asymmetric Unit

No.	Residues
1	A:323	-	A:348
2	A:366	-	A:419
3	A:467	-	A:474
4	B:22	-	B:96
5	B:155	-	B:220
6	C:323	-	C:348
7	C:467	-	C:474
8	D:22	-	D:96
9	D:155	-	D:220

Asymmetric Unit

No.	Residues
1	Pro A:469	-	Pro A:470
2	Gly B:118	-	Gly B:119
3	Ser B:139	-	Pro B:140
4	Trp B:226	-	Pro B:227
5	Pro C:469	-	Pro C:470
6	Ser D:139	-	Pro D:140
7	Trp D:226	-	Pro D:227

Asymmetric Unit (9, 18)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_SPIKE_CVHSA_014 *	K	344	R	SPIKE_CVHSA	---	---	A/C	K	344	R
2	UniProt	VAR_SPIKE_CVHSA_015 *	F	360	S	SPIKE_CVHSA	---	---	A/C	F	360	S
3	UniProt	VAR_SPIKE_CVHSA_016 *	R	426	G	SPIKE_CVHSA	---	---	A/C	R	426	G
4	UniProt	VAR_SPIKE_CVHSA_017 *	N	437	D	SPIKE_CVHSA	---	---	A/C	N	437	D
5	UniProt	VAR_SPIKE_CVHSA_018 *	L	472	P	SPIKE_CVHSA	---	---	A/C	L	472	P
6	UniProt	VAR_SPIKE_CVHSA_019 *	N	479	K	SPIKE_CVHSA	---	---	A/C	N	479	K
7	UniProt	VAR_SPIKE_CVHSA_020 *	D	480	G	SPIKE_CVHSA	---	---	A/C	D	480	G
8	UniProt	VAR_SPIKE_CVHSA_021 *	T	487	S	SPIKE_CVHSA	---	---	A/C	T	487	S
9	UniProt	VAR_SPIKE_CVHSA_022 *	F	501	Y	SPIKE_CVHSA	---	---	A/C	F	501	Y
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (9, 9)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_SPIKE_CVHSA_014 *	K	344	R	SPIKE_CVHSA	---	---	A	K	344	R
2	UniProt	VAR_SPIKE_CVHSA_015 *	F	360	S	SPIKE_CVHSA	---	---	A	F	360	S
3	UniProt	VAR_SPIKE_CVHSA_016 *	R	426	G	SPIKE_CVHSA	---	---	A	R	426	G
4	UniProt	VAR_SPIKE_CVHSA_017 *	N	437	D	SPIKE_CVHSA	---	---	A	N	437	D
5	UniProt	VAR_SPIKE_CVHSA_018 *	L	472	P	SPIKE_CVHSA	---	---	A	L	472	P
6	UniProt	VAR_SPIKE_CVHSA_019 *	N	479	K	SPIKE_CVHSA	---	---	A	N	479	K
7	UniProt	VAR_SPIKE_CVHSA_020 *	D	480	G	SPIKE_CVHSA	---	---	A	D	480	G
8	UniProt	VAR_SPIKE_CVHSA_021 *	T	487	S	SPIKE_CVHSA	---	---	A	T	487	S
9	UniProt	VAR_SPIKE_CVHSA_022 *	F	501	Y	SPIKE_CVHSA	---	---	A	F	501	Y
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (9, 9)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_SPIKE_CVHSA_014 *	K	344	R	SPIKE_CVHSA	---	---	C	K	344	R
2	UniProt	VAR_SPIKE_CVHSA_015 *	F	360	S	SPIKE_CVHSA	---	---	C	F	360	S
3	UniProt	VAR_SPIKE_CVHSA_016 *	R	426	G	SPIKE_CVHSA	---	---	C	R	426	G
4	UniProt	VAR_SPIKE_CVHSA_017 *	N	437	D	SPIKE_CVHSA	---	---	C	N	437	D
5	UniProt	VAR_SPIKE_CVHSA_018 *	L	472	P	SPIKE_CVHSA	---	---	C	L	472	P
6	UniProt	VAR_SPIKE_CVHSA_019 *	N	479	K	SPIKE_CVHSA	---	---	C	N	479	K
7	UniProt	VAR_SPIKE_CVHSA_020 *	D	480	G	SPIKE_CVHSA	---	---	C	D	480	G
8	UniProt	VAR_SPIKE_CVHSA_021 *	T	487	S	SPIKE_CVHSA	---	---	C	T	487	S
9	UniProt	VAR_SPIKE_CVHSA_022 *	F	501	Y	SPIKE_CVHSA	---	---	C	F	501	Y
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 2GHW)

(no "Exon" information available for 2GHW)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:191
 aligned with SPIKE_CVHSA | P59594 from UniProtKB/Swiss-Prot  Length:1255

    Alignment length:191
                                   328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508 
          SPIKE_CVHSA   319 ITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPAT 509
               SCOP domains d2ghwa_ A: Spike protein S1                                                                                                                                                                     SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhh.....hhhhheeeeeeeeee.hhhhhh.....eeee.hhhhhh....eeeeeeeeeeeee.hhhhhh.....hhhhhhh.........eeeeeehhhhhh........eee....................................eee.......hhhh.eeeeeeeeeee...... Sec.struct. author
                 SAPs(SNPs) -------------------------R---------------S-----------------------------------------------------------------G----------D----------------------------------P------KG------S-------------Y-------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ghw A 319 ITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPAT 509
                                   328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508

Chain B from PDB  Type:PROTEIN  Length:232
 aligned with Q65ZC9_HUMAN | Q65ZC9 from UniProtKB/TrEMBL  Length:240

    Alignment length:244
                                                                                                                                                                                                                                                                         240    
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240    
         Q65ZC9_HUMAN     1 QVQLVQSGGGLVQPGGSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDWGDSLDPWGKGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSTLSASIGDRVTITCRASEGIYRWLAWYQQKPGKAPKLLIYKASSLASRAPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQYSNYPLTFGGGTKLEIKR----   -
               SCOP domains d2ghwb2 B:1-117 Immunoglobulin heavy chain variable domain, VH                                                       --------------d2ghwb1 B:132-240 Immunoglobulin light chain kappa variable domain, VL-kappa                                 ---- SCOP domains
               CATH domains 2ghwB01 B:1-119 Immunoglobulins                                                                                        ------------2ghwB02 B:132-232 Immunoglobulins                                                                    ------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeeeee..eeeee...eeeee....------------....eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeee....eeeeee...hhhhheeeeeee......ee...eeeee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ghw B   1 EVQLVQSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGG------------SETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVKSGLVP 244
                                    10        20        30        40        50        60        70        80        90       100       110        |-         - |     140       150       160       170       180       190       200       210       220       230       240    
                                                                                                                                                119          132

Chain C from PDB  Type:PROTEIN  Length:188
 aligned with SPIKE_CVHSA | P59594 from UniProtKB/Swiss-Prot  Length:1255

    Alignment length:188
                                   327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497        
          SPIKE_CVHSA   318 NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLN 505
               SCOP domains d2ghwc_ C: Spike protein S1                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh.....hhhhheeeeeeeeee.hhhhhh.....eeee.hhhhhh....eeeeeeeeeeeee.hhhhhh.....hhhhhhh.........eeeeeehhhhhh........eee....................................eee............eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------R---------------S-----------------------------------------------------------------G----------D----------------------------------P------KG------S-------------Y---- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ghw C 318 NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLN 505
                                   327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497

Chain D from PDB  Type:PROTEIN  Length:231
 aligned with Q65ZC9_HUMAN | Q65ZC9 from UniProtKB/TrEMBL  Length:240

    Alignment length:245
                                                                                                                                                                                                                                                                         240     
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     
         Q65ZC9_HUMAN     1 QVQLVQSGGGLVQPGGSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDWGDSLDPWGKGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSTLSASIGDRVTITCRASEGIYRWLAWYQQKPGKAPKLLIYKASSLASRAPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQYSNYPLTFGGGTKLEIKR-----   -
               SCOP domains d2ghwd2 D:1-117 Immunoglobulin heavy chain variable domain, VH                                                       --------------d2ghwd1 D:132-245 Immunoglobulin light chain kappa variable domain, VL-kappa                                       SCOP domains
               CATH domains 2ghwD01 D:1-117 Immunoglobulins                                                                                      -------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.hhhh..eeeeee....eeeeee...hhhhheeeeeeeee..eeeee...eeeee..--------------....eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeee...eeeeee...hhhhh.eeeeee......ee...eeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ghw D   1 EVQLVQSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSS--------------SETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVKSGLVPR 245
                                    10        20        30        40        50        60        70        80        90       100       110      |  -         - |     140       150       160       170       180       190       200       210       220       230       240     
                                                                                                                                              117            132

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Sandwich (5577)

Topology: Immunoglobulin-like (3897)

Homologous Superfamily: Immunoglobulins (2282)

Sars coronavirus. Organism_taxid: 227859. (1)

1a	2ghwB02	B:132-232
1b	2ghwD01	D:1-117
1c	2ghwB01	B:1-119

(no "Pfam Domain" information available for 2GHW)

Asymmetric Unit(hide GO term definitions)

Chain A,C (SPIKE_CVHSA | P59594)

molecular function
	GO:0046789	host cell surface receptor binding	Interacting selectively and non-covalently with a receptor on the host cell surface.
biological process
	GO:0039654	fusion of virus membrane with host endosome membrane	Fusion of a virus membrane with a host endosome membrane. Occurs after internalization of the virus through the endosomal pathway, and results in release of the virus contents into the cell.
	GO:0061025	membrane fusion	The membrane organization process that joins two lipid bilayers to form a single membrane.
	GO:0039663	membrane fusion involved in viral entry into host cell	Merging of the virion membrane and a host membrane (host plasma membrane or host organelle membrane) that is involved in the uptake of a virus into a host cell.
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
	GO:0046813	receptor-mediated virion attachment to host cell	The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface.
	GO:0046718	viral entry into host cell	The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
	GO:0016032	viral process	A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
	GO:0019062	virion attachment to host cell	The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.
cellular component
	GO:0044173	host cell endoplasmic reticulum-Golgi intermediate compartment membrane	The lipid bilayer surrounding any of the compartments of the host cell ER-Golgi intermediate compartment system.
	GO:0033644	host cell membrane	Double layer of lipid molecules as it encloses host cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction.
	GO:0020002	host cell plasma membrane	The plasma membrane surrounding a host cell.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0019031	viral envelope	The lipid bilayer of a virion that surrounds the protein capsid. May also contain glycoproteins.
	GO:0019012	virion	The complete fully infectious extracellular virus particle.
	GO:0055036	virion membrane	The lipid bilayer surrounding a virion.

Chain B,D (Q65ZC9_HUMAN | Q65ZC9)

Asymmetric Unit
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	Cis Peptide Bonds
		Gly B:118 - Gly B:119	[ RasMol ]
		Pro A:469 - Pro A:470	[ RasMol ]
		Pro C:469 - Pro C:470	[ RasMol ]
		Ser B:139 - Pro B:140	[ RasMol ]
		Ser D:139 - Pro D:140	[ RasMol ]
		Trp B:226 - Pro B:227	[ RasMol ]
		Trp D:226 - Pro D:227	[ RasMol ]

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	2ghw
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	SPIKE_CVHSA \| P59594
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1dzb
2ajf	CRYSTALS TRUCTURE OF S1 RBD IN COMPLEX WITH ITS RECEPTOR
2ghv	CRYSTALS TRUCTURE OF S1 RBD

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 5)

Sites (5, 5)

SS Bonds (9, 9)

Cis Peptide Bonds (7, 7)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (9, 18)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (3, 6)

CATH Domains (1, 3)

Pfam Domains (0, 0)

Gene Ontology (17, 17)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File