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(-) Description

Title :  PUTATIVE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN FROM CORYNEBACTERIUM DIPHTHERIAE.
 
Authors :  J. Osipiuk, H. Li, S. Clancy, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  15 Feb 06  (Deposition) - 28 Mar 06  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Putative Molybdenum Cofactor Biosynthesis Protein, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Osipiuk, H. Li, S. Clancy, A. Joachimiak
X-Ray Crystal Structure Of Putative Molybdenum Cofactor Biosynthesis Protein From Corynebacterium Diphtheriae.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Gene: DIP0503
    Organism Scientific: CORYNEBACTERIUM DIPHTHERIAE
    Organism Taxid: 1717

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
2NA1Ligand/IonSODIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:74 , GLY A:75 , THR A:76 , PRO A:137 , SER A:138BINDING SITE FOR RESIDUE NA A 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2G2C)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:152
 aligned with Q6NJA6_CORDI | Q6NJA6 from UniProtKB/TrEMBL  Length:164

    Alignment length:163
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160   
         Q6NJA6_CORDI     1 MHIKSAIIVVSDRISTGTRENKALPLLQRLMSDELQDYSYELISEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQTPEATASFIHTRCEGLEQQILIHGSTHTHLAGLSRGIVGVTGRDDHAALIVNAPSSSGGITDTWAVISPVIPNIFEGLDA 163
               SCOP domains d2g2ca1 A:1-163 Putative molybden    um cofactor biosynthesis protein DIP0503                                                                                       SCOP domains
               CATH domains -2g2cA00 A:2-163 Molybdenum Cofac    tor Biosythetic Enzyme; Chain A                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeehhhhhhh....hhhhhhhhhhh.----.eeeeeeeeee..hhhhhhhhhhhhhhh...eeeee.........hhhhhhhh...eehhhhhhhhhhhh-------......eee........eeeee..hhhhhhhhhhhhh.hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2g2c A   1 mHIKSAIIVVSDRISTGTRENKALPLLQRLmSD----YSYELISEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQTPEATASFIHTRCEGLEQQILIHG-------GLSRGIVGVTGRDDHAALIVNAPSSSGGITDTWAVISPVIPNIFEGLDA 163
                            |       10        20        30| |    |40        50        60        70        80        90       100      |  -    |  120       130       140       150       160   
                            |                            31-MSE 38                                                                  107     115                                                
                            1-MSE                          33
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

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