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(-) Description

Title :  CRYSTAL STRUCTURE OF PROTEIN SPY2152 FROM STREPTOCOCCUS PYOGENES
 
Authors :  C. Chang, M. Cymborowski, Z. Otwinowski, W. Minor, L. -E. Lezondra, S. C A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  25 Jan 06  (Deposition) - 07 Mar 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, P. Coggill, A. Bateman, R. D. Finn, M. Cymborowski, Z. Otwinowski, W. Minor, L. Volkart, A. Joachimiak
The Structure Of Pyogenecin Immunity Protein, A Novel Bacteriocin-Like Immunity Protein From Streptococcus Pyogenes.
Bmc Struct. Biol. V. 9 75 2009
PubMed-ID: 20017931  |  Reference-DOI: 10.1186/1472-6807-9-75

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN SPY2152
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG
    Expression System Strain: BL21(DE3) DERIVATIVES
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: STREPTOCOCCUS PYOGENES
    Organism Taxid: 1314

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1MSE1Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2FU2)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2FU2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2FU2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2FU2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2FU2)

(-) Exons   (0, 0)

(no "Exon" information available for 2FU2)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:78
 aligned with Q48QT2_STRPM | Q48QT2 from UniProtKB/TrEMBL  Length:108

    Alignment length:78
                                    17        27        37        47        57        67        77        
          Q48QT2_STRPM    8 PSEKEILDALSKVYSEQVIQADDYFRQAIFELASQLEKEGMSSLLATKIDSLINQYILTHQFDAPKSIFDLSRLVKTK 85
               SCOP domains ------------------------------------------------------------------------------ SCOP domains
               CATH domains 2fu2A00 A:2-79 Ta0600-like domain                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  2fu2 A  2 PSEKEILDALSKVYSEQVIQADDYFRQAIFELASQLEKEGmSSLLATKIDSLINQYILTHQFDAPKSIFDLSRLVKTK 79
                                    11        21        31        41|       51        61        71        
                                                                   42-MSE                                 


Chain A from PDB  Type:PROTEIN  Length:78
 aligned with Q99XL4_STRP1 | Q99XL4 from UniProtKB/TrEMBL  Length:102

    Alignment length:78
                                    11        21        31        41        51        61        71        
          Q99XL4_STRP1    2 PSEKEILDALSKVYSEQVIQADDYFRQAIFELASQLEKEGMSSLLATKIDSLINQYILTHQFDAPKSIFDLSRLVKTK 79
               SCOP domains ------------------------------------------------------------------------------ SCOP domains
               CATH domains 2fu2A00 A:2-79 Ta0600-like domain                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  2fu2 A  2 PSEKEILDALSKVYSEQVIQADDYFRQAIFELASQLEKEGmSSLLATKIDSLINQYILTHQFDAPKSIFDLSRLVKTK 79
                                    11        21        31        41|       51        61        71        
                                                                   42-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2FU2)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2FU2)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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