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(-) Description

Title :  CRYSTAL STRUCTURE OF DIHYDROPYRIMIDINASE FROM SACCHAROMYCES KLUYVERI
 
Authors :  D. Dobritzsch, B. Lohkamp
Date :  25 Jan 06  (Deposition) - 14 Mar 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Alpha/Beta Barrel, Beta-Sandwich, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Lohkamp, B. Andersen, J. Piskur, D. Dobritzsch
The Crystal Structures Of Dihydropyrimidinases Reaffirm The Close Relationship Between Cyclic Amidohydrolases And Explain Their Substrate Specificity.
J. Biol. Chem. V. 281 13762 2006
PubMed-ID: 16517602  |  Reference-DOI: 10.1074/JBC.M513266200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DIHYDROPYRIMIDINASE
    Chains: A, B, C, D
    EC Number: 3.5.2.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: P343
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: PYD2
    Organism Scientific: LACHANCEA KLUYVERI
    Organism Taxid: 4934

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric/Biological Unit (2, 12)
No.NameCountTypeFull Name
1KCX4Mod. Amino AcidLYSINE NZ-CARBOXYLIC ACID
2ZN8Ligand/IonZINC ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:62 , HIS A:64 , KCX A:167 , ASP A:358 , ZN A:602 , HOH A:1603BINDING SITE FOR RESIDUE ZN A 601
2AC2SOFTWAREKCX A:167 , HIS A:199 , HIS A:255 , ZN A:601 , HOH A:1603BINDING SITE FOR RESIDUE ZN A 602
3AC3SOFTWAREHIS B:62 , HIS B:64 , KCX B:167 , ASP B:358BINDING SITE FOR RESIDUE ZN B 601
4AC4SOFTWAREKCX B:167 , HIS B:199 , HIS B:255 , HOH B:2603BINDING SITE FOR RESIDUE ZN B 602
5AC5SOFTWAREHIS C:62 , HIS C:64 , KCX C:167 , ASP C:358 , HOH C:3603BINDING SITE FOR RESIDUE ZN C 601
6AC6SOFTWAREKCX C:167 , HIS C:199 , HIS C:255 , HOH C:3603BINDING SITE FOR RESIDUE ZN C 602
7AC7SOFTWAREHIS D:62 , HIS D:64 , KCX D:167 , ASP D:358 , HOH D:4603BINDING SITE FOR RESIDUE ZN D 601
8AC8SOFTWAREKCX D:167 , HIS D:199 , HIS D:255 , HOH D:4603BINDING SITE FOR RESIDUE ZN D 602

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2FTY)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric/Biological Unit
No.Residues
1Lys A:141 -Pro A:142
2Ser A:331 -Pro A:332
3Tyr A:435 -Pro A:436
4Lys B:141 -Pro B:142
5Ser B:331 -Pro B:332
6Tyr B:435 -Pro B:436
7Lys C:141 -Pro C:142
8Ser C:331 -Pro C:332
9Tyr C:435 -Pro C:436
10Lys D:141 -Pro D:142
11Ser D:331 -Pro D:332
12Tyr D:435 -Pro D:436

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2FTY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2FTY)

(-) Exons   (0, 0)

(no "Exon" information available for 2FTY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:532
 aligned with DPYS_LACK1 | Q9P903 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541
           DPYS_LACK1     2 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGKSFMCTPKNEWVTEWRPKYE 541
               SCOP domains d2ftya1 A:2-56,A:441-541                               d2ftya2 A:57-440 Dihydropyrimidine amidohydrolase Pyd2                                                                                                                                                                                                                                                                                                                                          d2ftya1 A:2-56,A:441-541 Dihydropyrimidine amidohydrolase Pyd2                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee..eee....eee.eeeee..eeeeee...hhh.eeeeee....eeee.eee.................hhhhhhhhhhhh.eeeeeeeee........hhhhhhhhhhhhhhh......eeeeeee......hhhhhhhhhhhhhhhhhhhhh..eeeee........hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhh.....hhhhhh.hhhhhhhhhhhhhhhhhhh...eee....hhhhhhhhhhhhhh...eeeeehhhhhhhhhhhhh..--------....hhhhh...........hhhhhhh.........hhhhhhhhhhh....ee................hhhh.eehhhhee.hhhhh........hhhhhhhhhh.......hhhhhhhhhhhhhhhhh.................eeee.................hhhhh................eeeeee..eeeee..ee.hhhh.........hhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fty A   2 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVkMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCH--------GVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGKSFMCTPKNEWVTEWRPKYE 541
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161     | 171       181       191       201       211       221       231       241       251       261       271       281       291  |      - |     311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541
                                                                                                                                                                                               167-KCX                                                                                                                        294      303                                                                                                                                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:532
 aligned with DPYS_LACK1 | Q9P903 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541
           DPYS_LACK1     2 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGKSFMCTPKNEWVTEWRPKYE 541
               SCOP domains d2ftyb1 B:2-56,B:441-541                               d2ftyb2 B:57-440 Dihydropyrimidine amidohydrolase Pyd2                                                                                                                                                                                                                                                                                                                                          d2ftyb1 B:2-56,B:441-541 Dihydropyrimidine amidohydrolase Pyd2                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee..eee....eee.eeeee..eeeeee...hhh.eeeeee....eeee.eee.................hhhhhhhhhhhh.eeeeeeeee........hhhhhhhhhhhhhhh......eeeeeee..........hhhhhhhhhhhhhhhhh..eeeee........hhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.....hhhhhh.hhhhhhhhhhhhhhhhhhh...eee....hhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhh..--------....hhhhh...........hhhhhhh.........hhhhhhhhhhh....ee................hhhh.eehhhhee.hhhhh........hhhhhhhhhh.......hhhhhhhhhhhhhhhhh.................eeee.................hhhhh................eeeeee..eeeee..ee.hhhh.........hhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fty B   2 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVkMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCH--------GVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGKSFMCTPKNEWVTEWRPKYE 541
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161     | 171       181       191       201       211       221       231       241       251       261       271       281       291  |      - |     311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541
                                                                                                                                                                                               167-KCX                                                                                                                        294      303                                                                                                                                                                                                                                              


Chain C from PDB  Type:PROTEIN  Length:531
 aligned with DPYS_LACK1 | Q9P903 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541
           DPYS_LACK1     2 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGKSFMCTPKNEWVTEWRPKYE 541
               SCOP domains d2ftyc1 C:2-56,C:441-541                               d2ftyc2 C:57-440 Dihydropyrimidine amidohydrolase Pyd2                                                                                                                                                                                                                                                                                                                                          d2ftyc1 C:2-56,C:441-541 Dihydropyrimidine amidohydrolase Pyd2                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee..eee....eee.eeeee..eeeeee...hhh.eeeeee....eeee.eee.................hhhhhhhhhhhh.eeeeeeeee........hhhhhhhhhhhhhhh......eeeeeee......hhhhhhhhhhhhhhhhhhhhh..eeeee........hhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.....hhhhhh.hhhhhhhhhhhhhhhhhhh...eee....hhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhh.---------....hhhhh...........hhhhhhh.........hhhhhhhhhhh....ee................hhhh.eehhhhee.hhhhh........hhhhhhhhhh.......hhhhhhhhhhhhhhhhh.................eeee.................hhhhh................eeeeee..eeeee..ee.hhhh.........hhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fty C   2 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVkMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRC---------GVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGKSFMCTPKNEWVTEWRPKYE 541
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161     | 171       181       191       201       211       221       231       241       251       261       271       281       291 |       - |     311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541
                                                                                                                                                                                               167-KCX                                                                                                                       293       303                                                                                                                                                                                                                                              


Chain D from PDB  Type:PROTEIN  Length:530
 aligned with DPYS_LACK1 | Q9P903 from UniProtKB/Swiss-Prot  Length:542

    Alignment length:540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541
           DPYS_LACK1     2 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGKSFMCTPKNEWVTEWRPKYE 541
               SCOP domains d2ftyd1 D:2-56,D:441-541                               d2ftyd2 D:57-440 Dihydropyrimidine amidohydrolase Pyd2                                                                                                                                                                                                                                                                                                                                          d2ftyd1 D:2-56,D:441-541 Dihydropyrimidine amidohydrolase Pyd2                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee..eee....eee.eeeee..eeeeee...hhh.eeeeee....eeee.eee.................hhhhhhhhhhhh.eeeeeeeee........hhhhhhhhhhhhhhh......eeeeeee......hhhhhhhhhhhhhhhhhhhhh..eeeee........hhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh.....hhhhhh.hhhhhhhhhhhhhhhhhhh...eee....hhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhh..----------..hhhhh...........hhhhhhh.........hhhhhhhhhhh....ee................hhhh.eehhhhee.hhhhh........hhhhhhhhhh.......hhhhhhhhhhhhhhhhh.................eeee.................hhhhh................eeeeee..eeeee..ee.hhhh.........hhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2fty D   2 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVkMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCH----------GIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGKSFMCTPKNEWVTEWRPKYE 541
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161     | 171       181       191       201       211       221       231       241       251       261       271       281       291  |      -   |   311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541
                                                                                                                                                                                               167-KCX                                                                                                                        294        305
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2FTY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2FTY)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (DPYS_LACK1 | Q9P903)
molecular function
    GO:0004157    dihydropyrimidinase activity    Catalysis of the reaction: 5,6-dihydrouracil + H2O = 3-ureidopropionate.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016810    hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds    Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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  2fty
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  DPYS_LACK1 | Q9P903
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  3.5.2.2
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  DPYS_LACK1 | Q9P903
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DPYS_LACK1 | Q9P903: 2fvk 2fvm

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2FTY)