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(-) Description

Title :  CRYSTAL STRUCTURE OF AN ETHYL TERT-BUTYL ETHER D (ETHD) FAMILY PROTEIN (BH0200) FROM BACILLUS HALODURANS C-125 AT 1.40 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  24 Jan 06  (Deposition) - 07 Feb 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of (10172812) From Bacillus Halodurans At 1. 40 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - BH0200
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: 10172812
    Organism Scientific: BACILLUS HALODURANS
    Organism Taxid: 272558
    Strain: C-125

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 27)

Asymmetric/Biological Unit (4, 27)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2GOL4Ligand/IonGLYCEROL
3MSE20Mod. Amino AcidSELENOMETHIONINE
4UNL2Ligand/IonUNKNOWN LIGAND

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:12 , TYR A:14 , TYR A:27 , HIS A:31 , CYS A:63 , UNL A:109 , HOH A:170BINDING SITE FOR RESIDUE CL A 108
2AC2SOFTWARELEU A:10 , TYR A:14 , HIS A:31 , THR A:35 , SER A:85 , GLY A:86 , CL A:108 , HOH A:117 , HOH A:185BINDING SITE FOR RESIDUE UNL A 109
3AC3SOFTWAREALA B:12 , TYR B:14 , TYR B:27 , HIS B:31 , CYS B:63 , SER B:85 , HOH B:129 , HOH B:165 , HOH B:216 , HOH B:230BINDING SITE FOR RESIDUE UNL B 108
4AC4SOFTWARELYS A:83 , GLY A:86 , LYS A:87 , HOH A:171 , HOH A:183 , HOH A:201BINDING SITE FOR RESIDUE GOL A 110
5AC5SOFTWAREPRO A:39 , GLY A:40 , ARG A:42 , HOH A:121 , HOH A:178 , HOH A:210BINDING SITE FOR RESIDUE GOL A 111
6AC6SOFTWAREGLU B:15 , LYS B:95 , LEU B:97 , THR B:98 , HOH B:211BINDING SITE FOR RESIDUE GOL B 109
7AC7SOFTWAREGLY B:86 , LYS B:87 , MSE B:90 , HOH B:129 , HOH B:180 , HOH B:181BINDING SITE FOR RESIDUE GOL B 110

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2FTR)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2FTR)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2FTR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2FTR)

(-) Exons   (0, 0)

(no "Exon" information available for 2FTR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:103
 aligned with Q9KGB0_BACHD | Q9KGB0 from UniProtKB/TrEMBL  Length:107

    Alignment length:103
                                    13        23        33        43        53        63        73        83        93       103   
         Q9KGB0_BACHD     4 ENMMVKLIALYEQPEDKQAFDEHYFNTHAPLTRKIPGLRDMKVTRIVGSPMGESKFYLMCEMYYDDHESLQQAMRTDEGKASGKDAMKFAGKLLTLMIGEEMD 106
               SCOP domains d2ftra1 A:4-106 Hypothetical protein BH0200                                                             SCOP domains
               CATH domains 2ftrA00 A:4-106  [code=3.30.70.900, no name defined]                                                    CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee...hhhhhhhhhhhhhhhhhh......eeeeeeeee.......eeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 2ftr A   4 ENmmVKLIALYEQPEDKQAFDEHYFNTHAPLTRKIPGLRDmKVTRIVGSPmGESKFYLmCEmYYDDHESLQQAmRTDEGKASGKDAmKFAGKLLTLmIGEEmD 106
                              ||    13        23        33        43|       53|       63 |      73   |    83      | 93      |103 | 
                              ||                                   44-MSE    54-MSE  62-MSE         77-MSE       90-MSE   100-MSE| 
                              6-MSE                                                     65-MSE                                 105-MSE
                               7-MSE                                                                                               


Chain B from PDB  Type:PROTEIN  Length:100
 aligned with Q9KGB0_BACHD | Q9KGB0 from UniProtKB/TrEMBL  Length:107

    Alignment length:100
                                    15        25        35        45        55        65        75        85        95       105
         Q9KGB0_BACHD     6 MMVKLIALYEQPEDKQAFDEHYFNTHAPLTRKIPGLRDMKVTRIVGSPMGESKFYLMCEMYYDDHESLQQAMRTDEGKASGKDAMKFAGKLLTLMIGEEM 105
               SCOP domains d2ftrb_ B: Hypothetical protein BH0200                                                               SCOP domains
               CATH domains --2ftrB00 B:8-104  [code=3.30.70.900, no name defined]                                             - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee...hhhhhhhhhhhhhhhhhhh.....eeeeeeeee.......eeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 2ftr B   6 mmVKLIALYEQPEDKQAFDEHYFNTHAPLTRKIPGLRDmKVTRIVGSPmGESKFYLmCEmYYDDHESLQQAmRTDEGKASGKDAmKFAGKLLTLmIGEEm 105
                            ||      15        25        35        45        55      | 65        75 |      85    |   95    |  105
                            ||                                   44-MSE    54-MSE  62-MSE         77-MSE       90-MSE   100-MSE|
                            6-MSE                                                     65-MSE                                 105-MSE
                             7-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2FTR)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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