Chain A from PDB Type:PROTEIN Length:68
aligned with VMI2_HHV8P | Q98157 from UniProtKB/Swiss-Prot Length:94
Alignment length:68
36 46 56 66 76 86
VMI2_HHV8P 27 SWHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR 94
SCOP domains d2fj2a1 A:4-71 Macrophage inflammatory protein, MIP SCOP domains
CATH domains 2fj2A00 A:4-71 [code=2.40.50.40, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------SMALL_CYTOKINES_CC PDB: A:11-52 ------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
2fj2 A 4 SWHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR 71
13 23 33 43 53 63
Chain B from PDB Type:PROTEIN Length:67
aligned with VMI2_HHV8P | Q98157 from UniProtKB/Swiss-Prot Length:94
Alignment length:67
37 47 57 67 77 87
VMI2_HHV8P 28 WHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR 94
SCOP domains d2fj2b1 B:5-71 Macrophage inflammatory protein, MIP SCOP domains
CATH domains 2fj2B00 B:5-71 [code=2.40.50.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eee.........hhh.eeeeee........eeeeee....eeeee..hhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------SMALL_CYTOKINES_CC PDB: B:11-52 ------------------- PROSITE
Transcript ------------------------------------------------------------------- Transcript
2fj2 B 5 WHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR 71
14 24 34 44 54 64
Chain C from PDB Type:PROTEIN Length:68
aligned with VMI2_HHV8P | Q98157 from UniProtKB/Swiss-Prot Length:94
Alignment length:68
36 46 56 66 76 86
VMI2_HHV8P 27 SWHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR 94
SCOP domains d2fj2c1 C:4-71 Macrophage inflammatory protein, MIP SCOP domains
CATH domains 2fj2C00 C:4-71 [code=2.40.50.40, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------SMALL_CYTOKINES_CC PDB: C:11-52 ------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
2fj2 C 4 SWHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR 71
13 23 33 43 53 63
Chain D from PDB Type:PROTEIN Length:67
aligned with VMI2_HHV8P | Q98157 from UniProtKB/Swiss-Prot Length:94
Alignment length:67
37 47 57 67 77 87
VMI2_HHV8P 28 WHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR 94
SCOP domains d2fj2d1 D:5-71 Macrophage inflammatory protein, MIP SCOP domains
CATH domains 2fj2D00 D:5-71 [code=2.40.50.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------SMALL_CYTOKINES_CC PDB: D:11-52 ------------------- PROSITE
Transcript ------------------------------------------------------------------- Transcript
2fj2 D 5 WHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR 71
14 24 34 44 54 64
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |