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(-) Description

Title :  NMR STRUCTURE OF SMP-1 (SMALL MYRISTOYLATED PROTEIN) FROM LEISHMANIA MAJOR
 
Authors :  P. R. Gooley, H. D. T. Mertens, D. Tull, M. J. Mcconville
Date :  14 Dec 05  (Deposition) - 05 Dec 06  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (24x)
Keywords :  Beta Sheet, Protein Transport, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Tull, H. D. T. Mertens, P. R. Gooley, M. J. Mcconville
Function, Membrane Targetting And Structure Of Smp-1
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - SMALL MYRISTOYLATED PROTEIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PGEX-6P-3
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: LEISHMANIA MAJOR
    Organism Taxid: 5664
    Synonym: SMP-1

 Structural Features

(-) Chains, Units

  
NMR Structure (24x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:131
 aligned with Q5SDH5_LEIMA | Q5SDH5 from UniProtKB/TrEMBL  Length:131

    Alignment length:131
                                    10        20        30        40        50        60        70        80        90       100       110       120       130 
         Q5SDH5_LEIMA     1 MGCGASSENSSVTYVNGRPTFVGEEVTKGFEKDNGLLFRIVNKKKKQWAYYNDTTQYEMHVLVTFNEDCDIKALGKTKLEQQENGEWVASVVVYPCETEMFIEGRVNGFKSKMDALPLSEEYRQHQAEKDK 131
               SCOP domains d2fe0a1 A:1-131 Small myristoylated protein 1, Smp-1                                                                                SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................eeee........eeeeee....eeeeee....eeeeeeeeee....eee....eeee....eeeeeeee....eeeeeee....eeeeeeeee.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fe0 A   1 MGCGASSENSSVTYVNGRPTFVGEEVTKGFEKDNGLLFRIVNKKKKQWAYYNDTTQYEMHVLVTFNEDCDIKALGKTKLEQQENGEWVASVVVYPCETEMFIEGRVNGFKSKMDALPLSEEYRQHQAEKDK 131
                                    10        20        30        40        50        60        70        80        90       100       110       120       130
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (Q5SDH5_LEIMA | Q5SDH5)
cellular component
    GO:0060170    ciliary membrane    The portion of the plasma membrane surrounding a cilium.

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6910 CHEMICAL SHIFT ASSIGNMENTS