2F8J - JenaLib

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Biological Unit 1 (Jmol Viewer)

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Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (EC 2.6.1.9) (IMIDAZOLE ACETOL-PHOSPHATE TRANSFERASE) (TM1040) FROM THERMOTOGA MARITIMA AT 2.40 A RESOLUTION

Authors :   Joint Center For Structural Genomics (Jcsg)

Date :   02 Dec 05 (Deposition) - 21 Feb 06 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.40

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Tm1040, Histidinol-Phosphate Aminotransferase (Ec 2. 6. 1. 9) (Imidazole Acetol-Phosphate Transferase, Structural Genomics, Psi, Protein Structure Initiative, Joint Center For Structural Genomics, Jcsg, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Histidinol-Phosphate Aminotransferase (Ec 2. 6. 1. 9) (Imidazole Acetol-Phosphate Transferase) (Tm1040) From Thermotoga Maritima At 2. 40 A Resolution
To Be Published
PubMed: search

Molecule 1 - HISTIDINOL-PHOSPHATE AMINOTRANSFERASE
	Chains	:	A, B, C, D
	EC Number	:	2.6.1.9
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	HISC
	Organism Scientific	:	THERMOTOGA MARITIMA
	Organism Taxid	:	2336
	Synonym	:	IMIDAZOLE ACETOL-PHOSPHATE TRANSAMINASE

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 17)

No.	Name	Count	Type	Full Name
1	EDO	13	Ligand/Ion	1,2-ETHANEDIOL
2	PMP	4	Ligand/Ion	4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE

Biological Unit 1 (2, 10)

No.	Name	Count	Type	Full Name
1	EDO	8	Ligand/Ion	1,2-ETHANEDIOL
2	PMP	2	Ligand/Ion	4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE

Biological Unit 2 (2, 7)

No.	Name	Count	Type	Full Name
1	EDO	5	Ligand/Ion	1,2-ETHANEDIOL
2	PMP	2	Ligand/Ion	4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE

Asymmetric Unit (17, 17)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:84 , ALA A:85 , ASP A:86 , TYR A:106 , ASN A:149 , ASP A:173 , TYR A:176 , THR A:199 , SER A:201 , LYS A:202 , ARG A:210 , HOH A:567 , TYR B:53	BINDING SITE FOR RESIDUE PMP A 500
02	AC2	SOFTWARE	TYR A:53 , GLY B:84 , ALA B:85 , ASP B:86 , TYR B:106 , ASN B:149 , ASP B:173 , ALA B:175 , TYR B:176 , THR B:199 , SER B:201 , LYS B:202 , ARG B:210	BINDING SITE FOR RESIDUE PMP B 500
03	AC3	SOFTWARE	GLY C:84 , ALA C:85 , ASP C:86 , TYR C:106 , ASN C:149 , ASP C:173 , ALA C:175 , TYR C:176 , THR C:199 , SER C:201 , LYS C:202 , ARG C:210 , TYR D:53	BINDING SITE FOR RESIDUE PMP C 500
04	AC4	SOFTWARE	TYR C:53 , LEU D:26 , GLY D:84 , ALA D:85 , ASP D:86 , TYR D:106 , ASN D:149 , ASP D:173 , ALA D:175 , TYR D:176 , THR D:199 , SER D:201 , LYS D:202	BINDING SITE FOR RESIDUE PMP D 500
05	AC5	SOFTWARE	GLU A:218	BINDING SITE FOR RESIDUE EDO A 501
06	AC6	SOFTWARE	GLU C:294 , LEU C:297 , GLU C:298 , ARG C:301 , HOH C:597	BINDING SITE FOR RESIDUE EDO C 501
07	AC7	SOFTWARE	THR A:302 , ARG C:43 , ARG C:44 , LEU C:45 , HOH C:584	BINDING SITE FOR RESIDUE EDO C 502
08	AC8	SOFTWARE	GLU C:87 , TYR C:90 , LEU C:229 , GLU D:87 , TYR D:90 , VAL D:91 , LEU D:229	BINDING SITE FOR RESIDUE EDO D 501
09	AC9	SOFTWARE	LYS B:76 , ASN B:77 , VAL B:79 , SER B:80 , ILE B:221 , ASN B:225	BINDING SITE FOR RESIDUE EDO B 501
10	BC1	SOFTWARE	ARG B:130 , ILE B:131 , GLU B:133	BINDING SITE FOR RESIDUE EDO B 502
11	BC2	SOFTWARE	ARG A:51 , TYR B:23 , GLU B:323	BINDING SITE FOR RESIDUE EDO B 503
12	BC3	SOFTWARE	LYS B:64 , SER B:67 , TYR B:68 , LEU B:245 , ASP B:246 , ARG B:248	BINDING SITE FOR RESIDUE EDO B 504
13	BC4	SOFTWARE	TYR C:68 , PHE C:251 , THR C:255	BINDING SITE FOR RESIDUE EDO C 503
14	BC5	SOFTWARE	TYR D:68 , ALA D:175 , TYR D:177 , GLU D:178	BINDING SITE FOR RESIDUE EDO D 502
15	BC6	SOFTWARE	TYR B:68 , GLU B:178 , PHE B:204 , PHE B:251 , GLU B:252 , THR B:255 , HOH B:564	BINDING SITE FOR RESIDUE EDO B 505
16	BC7	SOFTWARE	ARG A:275 , GLU A:289 , HOH A:593	BINDING SITE FOR RESIDUE EDO A 502
17	BC8	SOFTWARE	ARG A:262 , GLU A:263 , ARG A:280	BINDING SITE FOR RESIDUE EDO A 503

(no "SS Bond" information available for 2F8J)

Asymmetric Unit

No.	Residues
1	Ser A:56	-	Pro A:57
2	Pro A:103	-	Pro A:104
3	Asn A:146	-	Pro A:147
4	Asn A:149	-	Pro A:150
5	Ser B:56	-	Pro B:57
6	Pro B:103	-	Pro B:104
7	Asn B:146	-	Pro B:147
8	Asn B:149	-	Pro B:150
9	Asn C:2	-	Pro C:3
10	Ser C:56	-	Pro C:57
11	Pro C:103	-	Pro C:104
12	Asn C:146	-	Pro C:147
13	Asn C:149	-	Pro C:150
14	Ser D:56	-	Pro D:57
15	Pro D:103	-	Pro D:104
16	Asn D:146	-	Pro D:147
17	Asn D:149	-	Pro D:150

(no "SAP(SNP)/Variant" information available for 2F8J)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	AA_TRANSFER_CLASS_2	PS00599	Aminotransferases class-II pyridoxal-phosphate attachment site.	HIS8_THEMA	199-208	4	A:199-208 B:199-208 C:199-208 D:199-208

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	AA_TRANSFER_CLASS_2	PS00599	Aminotransferases class-II pyridoxal-phosphate attachment site.	HIS8_THEMA	199-208	2	A:199-208 B:199-208 - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	AA_TRANSFER_CLASS_2	PS00599	Aminotransferases class-II pyridoxal-phosphate attachment site.	HIS8_THEMA	199-208	2	- - C:199-208 D:199-208

(no "Exon" information available for 2F8J)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:335
 aligned with HIS8_THEMA | Q9X0D0 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:335
                             1                                                                                                                                                                                                                                                                                                                                             
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329     
           HIS8_THEMA     - -MNPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILRELEVF 334
               SCOP domains d2f8ja_ A: Histidinol-phosphate aminotransferase HisC                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 2f8jA01 A:0-43,A:247-334                    2f8jA02 A:44-246 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                       2f8jA01 A:0-43,A:247-334 Aspartate Aminotransferase, domain 1                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhh..........ee..........hhhhhhhhhhhh..hhhhh.....hhhhhhhhhhhhh....hhh.eeeeehhhhhhhhhhhhh.eeee.....hhhhhhhhhhh..eee.................eeeeee..........hhhhhhhhhh...eeeee..hhhhh...hhhhhhh...eeeeee...........eeeeeehhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.ee......eeeee.hhhhhhhhhhhhhhh.ee.eee..eeeee..hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFE------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2f8j A   0 HMNPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILRELEVF 334
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329

Chain B from PDB  Type:PROTEIN  Length:333
 aligned with HIS8_THEMA | Q9X0D0 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:333
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331   
           HIS8_THEMA     2 NPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILRELEVF 334
               SCOP domains d2f8jb_ B: Histidinol-phosphate aminotransferase HisC                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 2f8jB01 B:2-43,B:247-334                  2f8jB02 B:44-246 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                       2f8jB01 B:2-43,B:247-334 Aspartate Aminotransferase, domain 1                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh..........ee..........hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhh....hhh.eeeeehhhhhhhhhhhhh.eeee.....hhhhhhhhhh...eee.................eeeeee..........hhhhhhhhhh...eeeee..hhhhhh..hhhhhhh...eeeeee...........eeeeeehhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeee.hhhhhhhhhhhhhhh.ee.eee..eeeee..hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFE------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2f8j B   2 NPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILRELEVF 334
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331

Chain C from PDB  Type:PROTEIN  Length:335
 aligned with HIS8_THEMA | Q9X0D0 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:335
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330     
           HIS8_THEMA     1 MNPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILRELEVFK 335
               SCOP domains d2f8jc_ C: Histidinol-phosphate aminotransferase HisC                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 2f8jC01 C:1-43,C:247-335                   2f8jC02 C:44-246 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                       2f8jC01 C:1-43,C:247-335 Aspartate Aminotransferase, domain 1                             CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhh..........ee..........hhhhhhhhhhhh..hhhhh.....hhhhhhhhhhhhh....hhh.eeeeehhhhhhhhhhhhh.eeee.....hhhhhhhhhhh..eee.................eeeeee..........hhhhhhhhhh...eeeee..hhhhh...hhhhhhh...eeeeee...........eeeeeehhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeee.hhhhhhhhhhhhhhh.ee.eee..eeeee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFE------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2f8j C   1 MNPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILRELEVFK 335
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330

Chain D from PDB  Type:PROTEIN  Length:333
 aligned with HIS8_THEMA | Q9X0D0 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:333
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331   
           HIS8_THEMA     2 NPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILRELEVF 334
               SCOP domains d2f8jd_ D: Histidinol-phosphate aminotransferase HisC                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 2f8jD01 D:2-43,D:247-334                  2f8jD02 D:44-246 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                       2f8jD01 D:2-43,D:247-334 Aspartate Aminotransferase, domain 1                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh..........ee..........hhhhhhhhhhhh..hhhhh.....hhhhhhhhhhhhh....hhh.eeeehhhhhhhhhhhhhh.eeee.....hhhhhhhhhh...eee.................eeeeee..........hhhhhhhhhhh..eeeee..hhhhhh..hhhhhhh...eeeeee............eeeeehhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeee.hhhhhhhhhhhhhhhhee.ee...eeeee..hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFE------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2f8j D   2 NPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILRELEVF 334
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: PLP-dependent transferase-like (627)

Superfamily: PLP-dependent transferases (625)

Family: AAT-like (184)

Protein domain: Histidinol-phosphate aminotransferase HisC (11)

Thermotoga maritima [TaxId: 2336] (5)

1a	d2f8ja_	A:
1b	d2f8jb_	B:
1c	d2f8jc_	C:
1d	d2f8jd_	D:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Aspartate Aminotransferase; domain 2 (384)

Homologous Superfamily: Type I PLP-dependent aspartate aminotransferase-like (Major domain) (384)

Thermotoga maritima. Organism_taxid: 2336. (4)

1a	2f8jA02	A:44-246
1b	2f8jB02	B:44-246
1c	2f8jC02	C:44-246
1d	2f8jD02	D:44-246

Architecture: Alpha-Beta Complex (3881)

Topology: Aspartate Aminotransferase, domain 1 (355)

Homologous Superfamily: Aspartate Aminotransferase, domain 1 (354)

Thermotoga maritima. Organism_taxid: 2336. (4)

2a	2f8jA01	A:0-43,A:247-334
2b	2f8jC01	C:1-43,C:247-335
2c	2f8jB01	B:2-43,B:247-334
2d	2f8jD01	D:2-43,D:247-334

(no "Pfam Domain" information available for 2F8J)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (HIS8_THEMA | Q9X0D0)

molecular function
	GO:0080130	L-phenylalanine:2-oxoglutarate aminotransferase activity	Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = phenylpyruvate + L-glutamate.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0004400	histidinol-phosphate transaminase activity	Catalysis of the reaction: L-histidinol-phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate.
	GO:0030170	pyridoxal phosphate binding	Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
	GO:0008483	transaminase activity	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0008652	cellular amino acid biosynthetic process	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
	GO:0000105	histidine biosynthetic process	The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Asymmetric Unit
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		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asn A:146 - Pro A:147	[ RasMol ]
		Asn A:149 - Pro A:150	[ RasMol ]
		Asn B:146 - Pro B:147	[ RasMol ]
		Asn B:149 - Pro B:150	[ RasMol ]
		Asn C:146 - Pro C:147	[ RasMol ]
		Asn C:149 - Pro C:150	[ RasMol ]
		Asn C:2 - Pro C:3	[ RasMol ]
		Asn D:146 - Pro D:147	[ RasMol ]
		Asn D:149 - Pro D:150	[ RasMol ]
		Pro A:103 - Pro A:104	[ RasMol ]
		Pro B:103 - Pro B:104	[ RasMol ]
		Pro C:103 - Pro C:104	[ RasMol ]
		Pro D:103 - Pro D:104	[ RasMol ]
		Ser A:56 - Pro A:57	[ RasMol ]
		Ser B:56 - Pro B:57	[ RasMol ]
		Ser C:56 - Pro C:57	[ RasMol ]
		Ser D:56 - Pro D:57	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	2f8j
		Family and Domain Information	:	ProDom \| SYSTERS
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
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	HIS8_THEMA \| Q9X0D0
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	2.6.1.9
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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
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	HIS8_THEMA \| Q9X0D0
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UniProtKB/Swiss-Prot
	HIS8_THEMA \| Q9X0D0	:	1h1c 1uu0 1uu1 1uu2

(no "Related Entries Specified in the PDB File" available for 2F8J)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 17)

Sites (17, 17)

SS Bonds (0, 0)

Cis Peptide Bonds (17, 17)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 4)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (1, 4)

CATH Domains (2, 8)

Pfam Domains (0, 0)

Gene Ontology (10, 10)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File