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(-) Description

Title :  X-RAY CRYSTAL STRUCTURE OF PROTEIN BT_1218 FROM BACTEROIDES THETAIOTAOMICRON. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BTR8.
 
Authors :  S. M. Vorobiev, M. Abashidze, J. Seetharaman, F. Forouhar, R. Xiao, L. - C. Ma, G. T. Montelione, L. Tong, J. F. Hunt, Northeast Structural Genomics Consortium (Nesg)
Date :  15 Nov 05  (Deposition) - 22 Nov 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Q8A8E9_bactin, Nesg, Btr8, Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Vorobiev, M. Abashidze, J. Seetharaman, F. Forouhar, R. Xiao, L. -C. Ma, G. T. Montelione, L. Tong, J. F. Hunt
Crystal Structure Of The Q8A8E9_bactin Hypothetical Protein From Bacteroides Thetaiotaomicron.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN, WITH CONSERVED DOMAIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)+MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BT1218
    Organism Scientific: BACTEROIDES THETAIOTAOMICRON
    Organism Taxid: 818

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 12)

Asymmetric Unit (1, 12)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2F20)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2F20)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2F20)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:233
 aligned with Q8A8E9_BACTN | Q8A8E9 from UniProtKB/TrEMBL  Length:232

    Alignment length:233
                                                                                                                                                                                                                                                                232  
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231|  
         Q8A8E9_BACTN     2 CFHNSMSAKAIKVAARYGRQSDVVEIYQSILDEQYHVNAFTFPRYPIITSSDEVQVFNWGLIPFWVRSEEDATEIRKMTLNARADTIFEKPSFREPIMKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSMAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYIDNTKHRMPAILTQEEEEKWLNPSLSKAEIASLLKPFDTEKMDAYVIRNDFLKKSPNDPTIVQRA--   -
               SCOP domains d2f20a1 A:2-232 Hypothetical protein BT1218                                                                                                                                                                                            -- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhh...hhhhhhhhhhhh.eeeee.hhh.eeee.......eeeee........hhhhhhhhhhhh.eee.hhh.......hhhhhheeeeee.eeeeeeee..eeeeeeeee.....eeeeeeeeeee......eeeeeeeeeee.hhhhhhhh....eee.eehhhhhhhhh....hhhhhhhh....hhh.eeeee.hhhhhhh...hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2f20 A   2 CFHNSmSAKAIKVAARYGRQSDVVEIYQSILDEQYHVNAFTFPRYPIITSSDEVQVFNWGLIPFWVRSEEDATEIRKmTLNARADTIFEKPSFREPImKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSmAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYIDNTKHRmPAILTQEEEEKWLNPSLSKAEIASLLKPFDTEKmDAYVIRNDFLKKSPNDPTIVQRALE 234
                                 |  11        21        31        41        51        61        71       |81        91       101       111       121       131   |   141       151       161       171   |   181       191       201       211       221       231   
                                 7-MSE                                                                  79-MSE              99-MSE                             135-MSE                                 175-MSE                           209-MSE                     


Chain B from PDB  Type:PROTEIN  Length:232
 aligned with Q8A8E9_BACTN | Q8A8E9 from UniProtKB/TrEMBL  Length:232

    Alignment length:232
                                                                                                                                                                                                                                                                232 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231| 
         Q8A8E9_BACTN     2 CFHNSMSAKAIKVAARYGRQSDVVEIYQSILDEQYHVNAFTFPRYPIITSSDEVQVFNWGLIPFWVRSEEDATEIRKMTLNARADTIFEKPSFREPIMKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSMAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYIDNTKHRMPAILTQEEEEKWLNPSLSKAEIASLLKPFDTEKMDAYVIRNDFLKKSPNDPTIVQRA-   -
               SCOP domains d2f20b_ B: Hypothetical protein BT1218                                                                                                                                                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhh.....hhhhhhhhhh.eeeee.hhh.eeee.......eeeee........hhhhhhhhh....eee.hhh.....hhhhhhhheeeeee.eeeeeeee..eeeeeeeee.....eeeeeeeeeee......eeeeeeeeeee.hhhhhhhh....eee.eehhhhhhhhh....hhhhhhhh....hhh.eeeee.hhhhhhh...hhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2f20 B   2 CFHNSmSAKAIKVAARYGRQSDVVEIYQSILDEQYHVNAFTFPRYPIITSSDEVQVFNWGLIPFWVRSEEDATEIRKmTLNARADTIFEKPSFREPImKKRCIVPSTGYFEWRHEGANKIPYYIYVKDEPIFSmAGIYDRWLDKDTGEEHETFSIITTDTNSLTDYIDNTKHRmPAILTQEEEEKWLNPSLSKAEIASLLKPFDTEKmDAYVIRNDFLKKSPNDPTIVQRAL 233
                                 |  11        21        31        41        51        61        71       |81        91       101       111       121       131   |   141       151       161       171   |   181       191       201       211       221       231  
                                 7-MSE                                                                  79-MSE              99-MSE                             135-MSE                                 175-MSE                           209-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2F20)

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(no "Pfam Domain" information available for 2F20)

(-) Gene Ontology  (0, 0)

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(-) Related Entries Specified in the PDB File

btr8