Chain A from PDB Type:PROTEIN Length:123
aligned with ENV_SIVM2 | P08810 from UniProtKB/Swiss-Prot Length:881
Alignment length:123
563 573 583 593 603 613 623 633 643 653 663 673
ENV_SIVM2 554 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTPDWNNDTWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 676
SCOP domains d2ezpa_ A: Retrovius gp41 protease-resistant core SCOP domains
CATH domains 2ezpA00 A:1-123 [code=1.10.287.210, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
2ezp A 1 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAFRQVAHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 123
10 20 30 40 50 60 70 80 90 100 110 120
Chain A from PDB Type:PROTEIN Length:123
aligned with Q88028_SIV | Q88028 from UniProtKB/TrEMBL Length:879
Alignment length:123
561 571 581 591 601 611 621 631 641 651 661 671
Q88028_SIV 552 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 674
SCOP domains d2ezpa_ A: Retrovius gp41 protease-resistant core SCOP domains
CATH domains 2ezpA00 A:1-123 [code=1.10.287.210, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
2ezp A 1 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAFRQVAHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 123
10 20 30 40 50 60 70 80 90 100 110 120
Chain B from PDB Type:PROTEIN Length:123
aligned with ENV_SIVM2 | P08810 from UniProtKB/Swiss-Prot Length:881
Alignment length:123
563 573 583 593 603 613 623 633 643 653 663 673
ENV_SIVM2 554 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTPDWNNDTWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 676
SCOP domains d2ezpb_ B: Retrovius gp41 protease-resistant core SCOP domains
CATH domains 2ezpB00 B:1-123 [code=1.10.287.210, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
2ezp B 1 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAFRQVAHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 123
10 20 30 40 50 60 70 80 90 100 110 120
Chain B from PDB Type:PROTEIN Length:123
aligned with Q88028_SIV | Q88028 from UniProtKB/TrEMBL Length:879
Alignment length:123
561 571 581 591 601 611 621 631 641 651 661 671
Q88028_SIV 552 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 674
SCOP domains d2ezpb_ B: Retrovius gp41 protease-resistant core SCOP domains
CATH domains 2ezpB00 B:1-123 [code=1.10.287.210, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
2ezp B 1 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAFRQVAHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 123
10 20 30 40 50 60 70 80 90 100 110 120
Chain C from PDB Type:PROTEIN Length:123
aligned with ENV_SIVM2 | P08810 from UniProtKB/Swiss-Prot Length:881
Alignment length:123
563 573 583 593 603 613 623 633 643 653 663 673
ENV_SIVM2 554 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTPDWNNDTWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 676
SCOP domains d2ezpc_ C: Retrovius gp41 protease-resistant core SCOP domains
CATH domains 2ezpC00 C:1-123 [code=1.10.287.210, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
2ezp C 1 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAFRQVAHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 123
10 20 30 40 50 60 70 80 90 100 110 120
Chain C from PDB Type:PROTEIN Length:123
aligned with Q88028_SIV | Q88028 from UniProtKB/TrEMBL Length:879
Alignment length:123
561 571 581 591 601 611 621 631 641 651 661 671
Q88028_SIV 552 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 674
SCOP domains d2ezpc_ C: Retrovius gp41 protease-resistant core SCOP domains
CATH domains 2ezpC00 C:1-123 [code=1.10.287.210, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
2ezp C 1 AQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGAAFRQVAHTTVPWPNASLTPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNS 123
10 20 30 40 50 60 70 80 90 100 110 120
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |