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(-) Description

Title :  SOLUTION STRUCTURE OF THE HUMAN STAP2 SH2 DOMAIN
 
Authors :  T. Kasai, K. Miyamoto, N. Tochio, T. Tomizawa, S. Koshiba, S. Watanabe, T. Harada, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date :  26 Mar 07  (Deposition) - 02 Oct 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Sh2 Domain, Phosphotyrosine Binding Domain, Protein Tyrosine Kinase, Signal Transduction, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Kasai, K. Miyamoto, N. Tochio, T. Tomizawa, S. Koshiba, S. Watanabe, T. Harada, T. Kigawa, S. Yokoyama
Solution Structure Of The Human Stap2 Sh2 Domain
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - SIGNAL-TRANSDUCING ADAPTOR PROTEIN 2
    Chains: A
    Engineered: YES
    Expression System Plasmid: P061218-22
    Expression System Vector Type: PLASMID
    Fragment: SH2 DOMAIN
    Gene: STAP2
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: CELL-FREE PROTEIN SYNTHESIS
    Synonym: STAP-2, BREAST TUMOR KINASE SUBSTRATE, BRK SUBSTRATE

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2EL8)

(-) Sites  (0, 0)

(no "Site" information available for 2EL8)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2EL8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2EL8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2EL8)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SH2PS50001 Src homology 2 (SH2) domain profile.STAP2_HUMAN133-233  1A:8-104

(-) Exons   (0, 0)

(no "Exon" information available for 2EL8)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:118
 aligned with STAP2_HUMAN | Q9UGK3 from UniProtKB/Swiss-Prot  Length:403

    Alignment length:170
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247
          STAP2_HUMAN    78 GSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILTVVELRVPTDLTLLPGHLYMMSEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKALVPFLLD 247
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......----------------------------------------------------.....................hhhhhhhhhhhh......eeee.......eeeee..........eee....................hhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------SH2  PDB: A:8-104 UniProt: 133-233                                                                   -------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2el8 A   1 GSSGSSG----------------------------------------------------EVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKALVPFLLD 118
                                  |  -         -         -         -         -         8        18        28        38        48        58        68        78        88        98       108       118
                                  7                                                    8
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2EL8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2EL8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2EL8)

(-) Gene Ontology  (4, 4)

NMR Structure(hide GO term definitions)
Chain A   (STAP2_HUMAN | Q9UGK3)
molecular function
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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