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(-) Description

Title :  CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN(AQ1494) FROM AQUIFEX AEOLICUS
 
Authors :  T. S. Kumarevel, H. Niwa, S. Kuramitsu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date :  01 Mar 07  (Deposition) - 04 Sep 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Hypothetical Protein, Aquifex Aeolicus, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. S. Kumarevel, H. Niwa, S. Kuramitsu, S. Yokoyama
Crystal Structure Of Hypothetical Protein(Aq1494) From Aquifex Aeolicus
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN AQ_1494
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-21A
    Expression System Strain: BL21(DE3)CODONPLUS-RIL-X
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: AQ1494
    Organism Scientific: AQUIFEX AEOLICUS
    Organism Taxid: 63363

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2EGJ)

(-) Sites  (0, 0)

(no "Site" information available for 2EGJ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2EGJ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2EGJ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2EGJ)

(-) PROSITE Motifs  (1, 2)

Asymmetric Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
14HBCOA_THIOESTERASEPS01328 4-hydroxybenzoyl-CoA thioesterase family active site.Y1494_AQUAE8-25
 		  2A:8-25
B:8-25
Biological Unit 1 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
14HBCOA_THIOESTERASEPS01328 4-hydroxybenzoyl-CoA thioesterase family active site.Y1494_AQUAE8-25
 		  4A:8-25
B:8-25

(-) Exons   (0, 0)

(no "Exon" information available for 2EGJ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:126
 aligned with Y1494_AQUAE | O67466 from UniProtKB/Swiss-Prot  Length:128

    Alignment length:126
                                    11        21        31        41        51        61        71        81        91       101       111       121      
          Y1494_AQUAE     2 PFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPKEVLEVLK 127
               SCOP domains d2egja_ A: automated matches                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee.hhhhh.......hhhhhhhhhhhhhhhhhhh..hhhhhhhh.eeeeeeeeeeee........eeeeeeeeeee...eeeeeeeeee..eeeeeeeeeeeeee..ee...hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------4HBCOA_THIOESTERAS------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2egj A   2 PFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPKEVLEVLK 127
                                    11        21        31        41        51        61        71        81        91       101       111       121      


Chain B from PDB  Type:PROTEIN  Length:126
 aligned with Y1494_AQUAE | O67466 from UniProtKB/Swiss-Prot  Length:128

    Alignment length:126
                                    11        21        31        41        51        61        71        81        91       101       111       121      
          Y1494_AQUAE     2 PFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPKEVLEVLK 127
               SCOP domains d2egjb_ B: automated matches                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhh..hhhhhhhh..eeeeeeeeeee........eeeeeeeeeee...eeeeeeeeee..eeeeeeeeeeeeee..eee..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------4HBCOA_THIOESTERAS------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2egj B   2 PFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPKEVLEVLK 127
                                    11        21        31        41        51        61        71        81        91       101       111       121
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2EGJ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2EGJ)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (Y1494_AQUAE | O67466)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Y1494_AQUAE | O67466: 2egi 2egr

(-) Related Entries Specified in the PDB File

2egi CELL PARAMETERS ARE DIFFERENT RELATED ID: AAE001001494.2 RELATED DB: TARGETDB