Chain A from PDB Type:PROTEIN Length:285
aligned with HA33_CLOBO | P46084 from UniProtKB/Swiss-Prot Length:286
Alignment length:285
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
HA33_CLOBO 2 SQTNANDLRNNEVFFISPSNNTNKVLDKISQSEVKLWNKLSGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDDTLMVSTQTSSSNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNLNSQIIVLWQWFDSSRQKWIIEYNETKSAYTLKCQENNRYLTWIQNSNNYVETYQSTDSLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVIVDSYHGNTNQQWIINLI 286
SCOP domains d2e4ma1 A:2-148 automated matches d2e4ma2 A:149-286 automated matches SCOP domains
CATH domains 2e4mA01 A:2-141 [code=2.80.10.50, no name defined] 2e4mA02 A:142-286 [code=2.80.10.50, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............eeeeee.....eeeee.....eeeee...hhhh.eeeeee....eeeeee......eeee......eeee....hhhh.eeeeee.....eeeee......eeee.....eeee....hhhh.eeeeehhhhhhh.eeeeeee......eeee......eeee....hhhh.eeeeee....eeeeee.....eeee.......eeee....hhhh.eeeeee..eeeeeeeee.....eeeee.hhh......eeeee...hhhh.eeeee. Sec.struct. author
SAPs(SNPs) (1) --------------------S-------------------------------------T-------------D-----------------------D-------L-------------T----I-----N-N-----------------------------------------------------L--------------------------------------------------------------------------T----N------------------- SAPs(SNPs) (1)
SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
PROSITE ----------RICIN_B_LECTIN PDB: A:12-140 UniProt: 12-140 ---------------------------------------RICIN_B_LECTIN PDB: A:180-284 UniProt: 180-284 -- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2e4m A 2 SQTNANDLRNNEVFFISPSNNTNKVLDKISQSEVKLWNKLSGANQKWRLIYDTNKQAYTIKVMDNTSLILTWDAPLSSVSVKTDTNTNNQYWYLLQDYISRNVILRNYMNPNLVLQYNTDDTLIVSTQTNSNNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNLNSQIIVLWQWFDSSRQKWTIEYNETKSAYTLKCQENNRYLTWIQNSNNYVETYQSTDSLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQTANGTHVIVDSYHGNTNQQWIINLI 286
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
Chain B from PDB Type:PROTEIN Length:285
aligned with HA33_CLOBO | P46084 from UniProtKB/Swiss-Prot Length:286
Alignment length:285
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
HA33_CLOBO 2 SQTNANDLRNNEVFFISPSNNTNKVLDKISQSEVKLWNKLSGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDDTLMVSTQTSSSNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNLNSQIIVLWQWFDSSRQKWIIEYNETKSAYTLKCQENNRYLTWIQNSNNYVETYQSTDSLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVIVDSYHGNTNQQWIINLI 286
SCOP domains d2e4mb1 B:2-148 automated matches d2e4mb2 B:149-286 automated matches SCOP domains
CATH domains 2e4mB01 B:2-141 [code=2.80.10.50, no name defined] 2e4mB02 B:142-286 [code=2.80.10.50, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............eeeeee.....eeeee.....eeeee...hhhh.eeeeee....eeeeee......eeee......eeee....hhhh.eeeeee.....eeeee......eeee.....eeee....hhhh.eeeeehhhhhhh.eeeeeee......eeee......eeee....hhhh.eeeeee....eeeeee.....eeee.......eeee....hhhh.eeeeee..eeeeeeeee.....eeeee.hhh......eeeee...hhhh.eeeee. Sec.struct. author
SAPs(SNPs) (1) --------------------S-------------------------------------T-------------D-----------------------D-------L-------------T----I-----N-N-----------------------------------------------------L--------------------------------------------------------------------------T----N------------------- SAPs(SNPs) (1)
SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
PROSITE ----------RICIN_B_LECTIN PDB: B:12-140 UniProt: 12-140 ---------------------------------------RICIN_B_LECTIN PDB: B:180-284 UniProt: 180-284 -- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2e4m B 2 SQTNANDLRNNEVFFISPSNNTNKVLDKISQSEVKLWNKLSGANQKWRLIYDTNKQAYTIKVMDNTSLILTWDAPLSSVSVKTDTNTNNQYWYLLQDYISRNVILRNYMNPNLVLQYNTDDTLIVSTQTNSNNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNLNSQIIVLWQWFDSSRQKWTIEYNETKSAYTLKCQENNRYLTWIQNSNNYVETYQSTDSLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQTANGTHVIVDSYHGNTNQQWIINLI 286
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281
Chain C from PDB Type:PROTEIN Length:143
aligned with HA17_CLOBO | P46083 from UniProtKB/Swiss-Prot Length:146
Alignment length:143
13 23 33 43 53 63 73 83 93 103 113 123 133 143
HA17_CLOBO 4 ERTFLPNGNYKIKSLFSDSLYLTYSSGALSFSNTSSLDNQKWKLEYISSSNGFRFSNVAEPNKYLAYNDYGFIYLSSSSNNSLWNPIKIAINSYIICTLSIVNVTDYAWTIYDNNNNITDQPILNLPNFDINNSNQILKLEKL 146
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeee.....eeeee....eeeee...hhhh.eeeee......eeeee..eeeeeeee.....eeee.......eeeeeee..eeeeee.......eeeeee...........eeeeee....hhhh.eeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2e4m C 4 ERTFLPNGNYKIKSLFSDSLYLTYSSGSLSFLNTSSLDNQKWKLEYISSSNGFRFSNVAEPNKYLAYNDYGFIYLSSSSNNSLWNPIKIAINSYIICTLSIVNVTDYAWTIYDNNNNITDQPILNLPNFDINNSNQILKLEKL 146
13 23 33 43 53 63 73 83 93 103 113 123 133 143
Chain C from PDB Type:PROTEIN Length:143
aligned with Q9LBR4_CLOBO | Q9LBR4 from UniProtKB/TrEMBL Length:146
Alignment length:143
13 23 33 43 53 63 73 83 93 103 113 123 133 143
Q9LBR4_CLOBO 4 ERTFLPNGNYKIKSLFSDSLYLTYSSGSLSFLNTSSLDNQKWKLEYISSSNGFRFSNVAEPNKYLAYNDYGFIYLSSSSNNSLWNPIKIAINSYIICTLSIVNVTDYAWTIYDNNNNITDQPILNLPNFDINNSNQILKLEKL 146
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeee.....eeeee....eeeee...hhhh.eeeee......eeeee..eeeeeeee.....eeee.......eeeeeee..eeeeee.......eeeeee...........eeeeee....hhhh.eeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2e4m C 4 ERTFLPNGNYKIKSLFSDSLYLTYSSGSLSFLNTSSLDNQKWKLEYISSSNGFRFSNVAEPNKYLAYNDYGFIYLSSSSNNSLWNPIKIAINSYIICTLSIVNVTDYAWTIYDNNNNITDQPILNLPNFDINNSNQILKLEKL 146
13 23 33 43 53 63 73 83 93 103 113 123 133 143
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |