Chain A from PDB Type:PROTEIN Length:244
aligned with SUFC_ECOLI | P77499 from UniProtKB/Swiss-Prot Length:248
Alignment length:244
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
SUFC_ECOLI 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWL 244
SCOP domains d2d3wa_ A: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeee..eeeeeeeeeee....eeeee....hhhhhhhhhhhh....eeeeeeeee..ee.hhhhhhhhhhh.eee...........hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhh..eeeee......hhhhhhhhhhhhhhh.....eeeee.....hhhhhh..eeeeee..eeeeee..hhhhhhh....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER------------------------------------------------------------------------------------ PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2d3w A 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWL 244
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
Chain B from PDB Type:PROTEIN Length:244
aligned with SUFC_ECOLI | P77499 from UniProtKB/Swiss-Prot Length:248
Alignment length:246
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
SUFC_ECOLI 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWLTE 246
SCOP domains d2d3wb_ B: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eeeeeeeee....eeeeeeeeee....eeeee.....hhhhhhhhhhh....eeeeeeeee..ee.hhhhhhhhhhhheee...........hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhh..eeeeee...-.hhhhhhhhhhhhhhhh....eeeeee..-hhhhhhh..eeeeee..eeeeee..hhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER-------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2d3w B 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDS-LDIDALKVVADGVNSLRDGKRSFIIVTHY-RILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWLTE 246
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | | 180 190 200 | | 210 220 230 240
174 | 204 |
176 206
Chain C from PDB Type:PROTEIN Length:241
aligned with SUFC_ECOLI | P77499 from UniProtKB/Swiss-Prot Length:248
Alignment length:244
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
SUFC_ECOLI 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWL 244
SCOP domains d2d3wc_ C: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeee..eeeeeeeeeee....eeeee.....hhhhhhhhhhh...eeeeeeeeee..ee.hhhhhhhhhhhhee.............hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhh..eeeeee..---hhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhh..eeeee....eeeee.hhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER------------------------------------------------------------------------------------ PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2d3w C 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESD---DIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWL 244
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | |180 190 200 210 220 230 240
173 177
Chain D from PDB Type:PROTEIN Length:243
aligned with SUFC_ECOLI | P77499 from UniProtKB/Swiss-Prot Length:248
Alignment length:244
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
SUFC_ECOLI 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWL 244
SCOP domains d2d3wd_ D: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeee..eeeeeeeeeee....eeeee......hhhhhh........eeeeeeeee........hhhhhhhhhee............hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhh...eeeeee..-..hhhhhhhhhhhhhhh.....eeeeee....hhhhhh..eeeeee..eeeeee..hhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER------------------------------------------------------------------------------------ PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2d3w D 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESD-GLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWL 244
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | | 180 190 200 210 220 230 240
173 |
175
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |