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Title :   CRYSTAL STRUCTURE OF MALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE FROM THERMUS THERMOPHILUS HB8

Authors :   S. Misaki, K. Suzuki, N. Kunishima, M. Sugawara, C. Kuroishi, Riken St Genomics/Proteomics Initiative (Rsgi)

Date :   31 May 05 (Deposition) - 13 Jun 06 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym./Biol. Unit : A,B

Keywords :   Transferase, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Misaki, K. Suzuki, N. Kunishima, M. Sugawara, C. Kuroishi
Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Thermus Thermophilus Hb8
To Be Published
PubMed: search

Molecule 1 - MALONYL COA-[ACYL CARRIER PROTEIN] TRANSACYLASE
	Chains	:	A, B
	EC Number	:	2.3.1.39
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	THERMUS THERMOPHILUS
	Organism Taxid	:	300852
	Strain	:	HB8

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 2CUY)

(no "Site" information available for 2CUY)

(no "SS Bond" information available for 2CUY)

Asymmetric/Biological Unit

No.	Residues
1	Gly A:48	-	Pro A:49
2	Gly B:48	-	Pro B:49

(no "SAP(SNP)/Variant" information available for 2CUY)

(no "PROSITE Motif" information available for 2CUY)

(no "Exon" information available for 2CUY)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:305
 aligned with Q5SL77_THET8 | Q5SL77 from UniProtKB/TrEMBL  Length:305

    Alignment length:305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     
         Q5SL77_THET8     1 MYAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLLKLMWEGPEEALTLTENQQPALLAAGYAAYRAFLEAGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGVEIANLNAPEQTVISGRRQAVEEAAERLKERRARVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSLRKALEVERA 305
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2cuyA01 A:1-121,A:191-305 Malonyl-Coenzyme A Acyl Carrier Protein, domain 2                                              2cuyA02 A:122-190  [code=3.30.70.250, no name defined]               2cuyA01 A:1-121,A:191-305 Malonyl-Coenzyme A Acyl Carrier Protein, domain 2                                         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..........hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhh......eeeeeee..hhhhhhhhhh....eeeeeeee..eeeeeeehhhhhhhhhhhhhh..eeee........hhhhhhhhhhhhhhhh..........ee......ee.hhhhhhhhhhhhhhh..hhhhhhhhhhhh...eeeee...hhhhhhhhhhh...eeeee.hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2cuy A   1 MYAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLLKLMWEGPEEALTLTENQQPALLAAGYAAYRAFLEAGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGVEIANLNAPEQTVISGRRQAVEEAAERLKERRARVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSLRKALEVERA 305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300

Chain B from PDB  Type:PROTEIN  Length:305
 aligned with Q5SL77_THET8 | Q5SL77 from UniProtKB/TrEMBL  Length:305

    Alignment length:305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     
         Q5SL77_THET8     1 MYAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLLKLMWEGPEEALTLTENQQPALLAAGYAAYRAFLEAGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGVEIANLNAPEQTVISGRRQAVEEAAERLKERRARVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSLRKALEVERA 305
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2cuyB01 B:1-121,B:191-305 Malonyl-Coenzyme A Acyl Carrier Protein, domain 2                                              2cuyB02 B:122-190  [code=3.30.70.250, no name defined]               2cuyB01 B:1-121,B:191-305 Malonyl-Coenzyme A Acyl Carrier Protein, domain 2                                         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..........hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhh....eeeeeeee..eeeeeeehhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhhhhhhhh.........ee......ee.hhhhhhhhhhhhh....hhhhhhhhhhhhh..eeeee...hhhhhhhhhhh...eeeee.hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2cuy B   1 MYAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLLKLMWEGPEEALTLTENQQPALLAAGYAAYRAFLEAGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGVEIANLNAPEQTVISGRRQAVEEAAERLKERRARVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSLRKALEVERA 305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2CUY)

(no "Pfam Domain" information available for 2CUY)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (Q5SL77_THET8 | Q5SL77)

molecular function
	GO:0004314	[acyl-carrier-protein] S-malonyltransferase activity	Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein].
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
		Gly A:48 - Pro A:49	[ RasMol ]
		Gly B:48 - Pro B:49	[ RasMol ]

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Description

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Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

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Exons (0, 0)

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