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(-) Description

Title :  MUSCLE CREATINE KINASE
 
Authors :  J. K. Rao, G. Bujacz, A. Wlodawer
Date :  28 Sep 98  (Deposition) - 13 Jan 99  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Creatine Kinase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. K. Rao, G. Bujacz, A. Wlodawer
Crystal Structure Of Rabbit Muscle Creatine Kinase.
Febs Lett. V. 439 133 1998
PubMed-ID: 9849893  |  Reference-DOI: 10.1016/S0014-5793(98)01355-6
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN (CREATINE KINASE)
    ChainsA
    EC Number2.7.3.2
    OrganHEART
    Organism CommonRABBIT
    Organism ScientificORYCTOLAGUS CUNICULUS
    Organism Taxid9986
    TissueMUSCLE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1SO44Ligand/IonSULFATE ION
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1SO48Ligand/IonSULFATE ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:132 , ARG A:320 , ARG A:341 , SO4 A:392 , HOH A:473 , HOH A:625 , HOH A:696BINDING SITE FOR RESIDUE SO4 A 391
2AC2SOFTWAREARG A:130 , ARG A:132 , ARG A:292 , SO4 A:391BINDING SITE FOR RESIDUE SO4 A 392
3AC3SOFTWAREVAL A:72 , ARG A:96 , SER A:285 , HOH A:572BINDING SITE FOR RESIDUE SO4 A 393
4AC4SOFTWARETHR A:108 , TRP A:273 , TYR A:279 , HOH A:609 , HOH A:699 , HOH A:777BINDING SITE FOR RESIDUE SO4 A 394
5ATPAUTHORSO4 A:391 , SO4 A:392THE SULFATES OCCUPY THE POSITIONS OF ALPHA AND GAMMA PHOSPHATES OF ATP.

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2CRK)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Trp A:211 -Pro A:212

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2CRK)

(-) PROSITE Motifs  (3, 3)

Asymmetric Unit (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PHOSPHAGEN_KINASE_NPS51509 Phosphagen kinase N-terminal domain profile.KCRM_RABIT11-98  1A:11-98
2PHOSPHAGEN_KINASE_CPS51510 Phosphagen kinase C-terminal domain profile.KCRM_RABIT125-367  1A:125-367
3PHOSPHAGEN_KINASEPS00112 Phosphagen kinase active site signature.KCRM_RABIT283-289  1A:283-289
Biological Unit 1 (3, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PHOSPHAGEN_KINASE_NPS51509 Phosphagen kinase N-terminal domain profile.KCRM_RABIT11-98  2A:11-98
2PHOSPHAGEN_KINASE_CPS51510 Phosphagen kinase C-terminal domain profile.KCRM_RABIT125-367  2A:125-367
3PHOSPHAGEN_KINASEPS00112 Phosphagen kinase active site signature.KCRM_RABIT283-289  2A:283-289

(-) Exons   (0, 0)

(no "Exon" information available for 2CRK)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:365
 aligned with KCRM_RABIT | P00563 from UniProtKB/Swiss-Prot  Length:381

    Alignment length:374
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377    
           KCRM_RABIT     8 NKYKLNYKSEEEYPDLSKHNNHMAKVLTPDLYKKLRDKETPSGFTLDDVIQTGVDNPGHPFIMTVGCVAGDEESYTVFKDLFDPIIQDRHGGFKPTDKHKTDLNHENLKGGDDLDPHYVLSSRVRTGRSIKGYTLPPHCSRGERRAVEKLSVEALNSLTGEFKGKYYPLKSMTEQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKSFLVWVNEEDHLRVISMEKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNEHLGYVLTCPSNLGTGLRGGVHVKLAHLSKHPKFEEILTRLRLQKRGTGGVDTAAVGSVFDISNADRLGSSEVEQVQLVVDGVKLMVEMEKKLEKGQSIDDMIPAQK 381
               SCOP domains d2crka1 A:8-102 Creatine kinase, N-domain                                                      d2crka2 A:103-381 Creatine kinase, C-terminal domain                                                                                                                                                                                                                                    SCOP domains
               CATH domains 2crkA01 A:8-102 Transferase Creatine Kinase, Chain A, domain 1                                 --2crkA02 A:105-380 Creatine Kinase; Chain                                                                                                                                                                                                                                            - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhh.........hhhhh..hhhhhhh..........hhhhhhhhhh..................hhhh.hhhhhhhhhhh...............hhhh..........eeeeeeeeee............hhhhhhhhhhhhhhhhh..hhh.eeeee.....hhhhhhhhhh.........hhhhhh..........eeeee....eeeee.....eeeeeeee...hhhhhhhhhhhhhhhhhhhhh.................hhh.....eeeeeee.........hhhhhhhh.eeee..---------.eeeeee.......hhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---PHOSPHAGEN_KINASE_N  PDB: A:11-98 UniProt: 11-98                                        --------------------------PHOSPHAGEN_KINASE_C  PDB: A:125-367 UniProt: 125-367                                                                                                                                                                                               -------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHOSPHA-------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2crk A   8 NKYKLNYKSEEEYPDLSKHNNHMAKVLTPDLYKKLRDKETPSGFTLDDVIQTGVDNPGHPFIMTVGCVAGDEESYTVFKDLFDPIIQDRHGGFKPTDKHKTDLNHENLKGGDDLDPHYVLSSRVRTGRSIKGYTLPPHCSRGERRAVEKLSVEALNSLTGEFKGKYYPLKSMTEQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKSFLVWVNEEDHLRVISMEKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNEHLGYVLTCPSNLGTGLRGGVHVKLAHLSKHPKFEEILTRLRLQKRGT---------SVFDISNADRLGSSEVEQVQLVVDGVKLMVEMEKKLEKGQSIDDMIPAQK 381
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317    |    -    |  337       347       357       367       377    
                                                                                                                                                                                                                                                                                                                                                    322       332                                                 

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 2)

Asymmetric Unit

(-) CATH Domains  (2, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2CRK)

(-) Gene Ontology  (11, 11)

Asymmetric Unit(hide GO term definitions)
Chain A   (KCRM_RABIT | P00563)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0004111    creatine kinase activity    Catalysis of the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016772    transferase activity, transferring phosphorus-containing groups    Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
biological process
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0009408    response to heat    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
cellular component
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

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 Related Entries

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        KCRM_RABIT | P005631u6r

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