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(-) Description

Title :  NMR STRUCTURE OF THE BACTERIAL PROTEIN YFHJ FROM E. COLI
 
Authors :  C. Pastore, G. Kelly, S. Adinolfi, J. E. Mc Cormick, A. Pastore
Date :  22 Aug 05  (Deposition) - 06 Dec 06  (Release) - 30 May 12  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Iron Binding Protein, Iron Sulphur Clusters, Isc Operon, Isc Proteins (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Pastore, S. Adinolfi, M. A. Huynen, V. Rybin, S. Martin, M. Mayer, B. Bukau, A. Pastore
Yfhj, A Molecular Adaptor In Iron-Sulfur Cluster Formation Or A Frataxin-Like Protein?
Structure V. 14 857 2006
PubMed-ID: 16698547  |  Reference-DOI: 10.1016/J.STR.2006.02.010

(-) Compounds

Molecule 1 - PROTEIN ISCX
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector: PET
    Expression System Vector Type: PLASMID
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83333
    Strain: K-12
    Synonym: PROTEIN YFHJ, YFHJ

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2BZT)

(-) Sites  (0, 0)

(no "Site" information available for 2BZT)

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:66
 aligned with ISCX_ECOLI | P0C0L9 from UniProtKB/Swiss-Prot  Length:66

    Alignment length:66
                                    10        20        30        40        50        60      
            ISCX_ECOLI    1 MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLVWLDEAE 66
               SCOP domains d2bzta_ A: automated matches                                       SCOP domains
               CATH domains 2bztA00 A:1-66 Hypothetical protein yfhj                           CATH domains
               Pfam domains ------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhh........hhhhhhhhhhhh..........hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------ Transcript
                  2bzt A  1 MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLVWLDEAE 66
                                    10        20        30        40        50        60
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2BZT)

(-) Gene Ontology  (7, 7)

NMR Structure(hide GO term definitions)
Chain A   (ISCX_ECOLI | P0C0L9)
molecular function
    GO:0004857    enzyme inhibitor activity    Binds to and stops, prevents or reduces the activity of an enzyme.
    GO:0008198    ferrous iron binding    Interacting selectively and non-covalently with ferrous iron, Fe(II).
    GO:0005506    iron ion binding    Interacting selectively and non-covalently with iron (Fe) ions.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0016226    iron-sulfur cluster assembly    The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.
    GO:0043086    negative regulation of catalytic activity    Any process that stops or reduces the activity of an enzyme.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ISCX_ECOLI | P0C0L9: 1uj8

(-) Related Entries Specified in the PDB File

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