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(-) Description

Title :  ANTI-COCAINE ANTIBODY 7.5.21, CRYSTAL FORM III
 
Authors :  E. Pozharski, A. Hewagama, A. Shanafelt, D. Ringe, G. A. Petsko
Date :  28 Jul 05  (Deposition) - 09 Aug 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  H,I,J,K,L,M,N,O
Biol. Unit 1:  H,L  (1x)
Biol. Unit 2:  I,M  (1x)
Biol. Unit 3:  J,N  (1x)
Biol. Unit 4:  K,O  (1x)
Biol. Unit 5:  H (1x),I (1x),J (1x),K (1x),L (1x),M (1x),N (1x),O (1x)
Biol. Unit 6:  H (1x),I (1x),J (1x),K (1x),L (1x),M (1x),N (1x),O (1x)
Biol. Unit 7:  H (1x),I (1x),J (1x),K (1x),L (1x),M (1x),N (1x),O (1x)
Biol. Unit 8:  H (1x),I (1x),J (1x),K (1x),L (1x),M (1x),N (1x),O (1x)
Biol. Unit 9:  I,K,M,O  (1x)
Biol. Unit 10:  H (1x),J (1x),L (1x),N (1x)
Biol. Unit 11:  J (1x),K (1x),N (1x),O (1x)
Biol. Unit 12:  H (1x),I (1x),L (1x),M (1x)
Keywords :  Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Pozharski, A. Hewagama, A. Shanafelt, D. Ringe, G. A. Petsko
Flexibility Of Packing: Four Crystal Forms Of An Anti-Cocaine Antibody 7. 5. 21
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - IMMUNOGLOBULIN LIGHT CHAIN KAPPA
    Cell Line: HYBRIDOMA
    Chains: L, M, N, O
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Strain: BALB/C
 
Molecule 2 - IMMUNOGLOBULIN HEAVY CHAIN
    Cell Line: HYBRIDOMA
    Chains: H, I, J, K
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Strain: BALB/C

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : HIJKLMNO
Biological Unit 1 (1x): H   L   
Biological Unit 2 (1x):  I   M  
Biological Unit 3 (1x):   J   N 
Biological Unit 4 (1x):    K   O
Biological Unit 5 (1x): H (1x)I (1x)J (1x)K (1x)L (1x)M (1x)N (1x)O (1x)
Biological Unit 6 (1x): H (1x)I (1x)J (1x)K (1x)L (1x)M (1x)N (1x)O (1x)
Biological Unit 7 (1x): H (1x)I (1x)J (1x)K (1x)L (1x)M (1x)N (1x)O (1x)
Biological Unit 8 (1x): H (1x)I (1x)J (1x)K (1x)L (1x)M (1x)N (1x)O (1x)
Biological Unit 9 (1x):  I K M O
Biological Unit 10 (1x): H (1x) J (1x) L (1x) N (1x) 
Biological Unit 11 (1x):   J (1x)K (1x)  N (1x)O (1x)
Biological Unit 12 (1x): H (1x)I (1x)  L (1x)M (1x)  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 31)

Asymmetric Unit (2, 31)
No.NameCountTypeFull Name
1GOL4Ligand/IonGLYCEROL
2SO427Ligand/IonSULFATE ION
Biological Unit 1 (2, 9)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2SO47Ligand/IonSULFATE ION
Biological Unit 2 (2, 9)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2SO48Ligand/IonSULFATE ION
Biological Unit 3 (2, 6)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2SO45Ligand/IonSULFATE ION
Biological Unit 4 (1, 7)
No.NameCountTypeFull Name
1GOL-1Ligand/IonGLYCEROL
2SO47Ligand/IonSULFATE ION
Biological Unit 5 (0, 0)
No.NameCountTypeFull Name
1GOL-1Ligand/IonGLYCEROL
2SO4-1Ligand/IonSULFATE ION
Biological Unit 6 (0, 0)
No.NameCountTypeFull Name
1GOL-1Ligand/IonGLYCEROL
2SO4-1Ligand/IonSULFATE ION
Biological Unit 7 (0, 0)
No.NameCountTypeFull Name
1GOL-1Ligand/IonGLYCEROL
2SO4-1Ligand/IonSULFATE ION
Biological Unit 8 (2, 15)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2SO413Ligand/IonSULFATE ION
Biological Unit 9 (2, 16)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2SO415Ligand/IonSULFATE ION
Biological Unit 10 (2, 9)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2SO47Ligand/IonSULFATE ION
Biological Unit 11 (2, 6)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2SO45Ligand/IonSULFATE ION
Biological Unit 12 (2, 9)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2SO48Ligand/IonSULFATE ION

(-) Sites  (31, 31)

Asymmetric Unit (31, 31)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREPHE K:27 , THR K:28 , TYR K:32 , HOH K:677 , PRO N:64 , ARG N:66 , ARG N:82BINDING SITE FOR RESIDUE SO4 N 601
02AC2SOFTWARETYR K:108 , LYS L:31 , SER L:32 , SER L:97 , HIS L:98 , HOH L:711 , HOH L:765 , HOH L:782 , LYS O:31BINDING SITE FOR RESIDUE SO4 L 602
03AC3SOFTWAREPHE H:27 , THR H:28 , PRO M:64 , ASP M:65 , ARG M:66 , ARG M:82 , HOH M:625 , HOH M:667BINDING SITE FOR RESIDUE SO4 M 603
04AC4SOFTWARETHR M:187 , ASP M:189 , ARG M:193BINDING SITE FOR RESIDUE SO4 M 604
05AC5SOFTWAREPRO H:61 , ASP H:62 , SER H:63 , HOH H:640 , HOH H:672 , ASP L:1 , PRO L:100 , SER M:158 , ARG M:160 , HIS M:194BINDING SITE FOR RESIDUE SO4 H 605
06AC6SOFTWARELYS M:31 , SER M:32 , HOH M:707 , ILE N:99BINDING SITE FOR RESIDUE SO4 M 606
07AC7SOFTWARELYS O:31 , SER O:32 , SER O:97 , HIS O:98BINDING SITE FOR RESIDUE SO4 O 607
08AC8SOFTWAREASP H:1 , LYS M:44 , LYS M:50 , HOH M:680 , HOH M:695BINDING SITE FOR RESIDUE SO4 M 608
09AC9SOFTWAREASN K:54 , HIS L:35 , LYS L:55 , HOH L:744 , HOH L:747BINDING SITE FOR RESIDUE SO4 L 609
10BC1SOFTWARELYS H:215 , ASP H:217 , LYS J:215 , ASP J:217BINDING SITE FOR RESIDUE SO4 H 610
11BC2SOFTWAREASN O:150 , THR O:202 , HIS O:203 , LYS O:204BINDING SITE FOR RESIDUE SO4 O 611
12BC3SOFTWARETHR L:187 , ASP L:189 , GLU L:190 , ARG L:193BINDING SITE FOR RESIDUE SO4 L 612
13BC4SOFTWAREHOH I:719 , ILE M:99 , LYS N:31 , SER N:32 , SER N:97 , HIS N:98BINDING SITE FOR RESIDUE SO4 N 613
14BC5SOFTWAREASN J:54 , GLY M:34 , HIS M:35 , HOH M:646 , HOH M:704BINDING SITE FOR RESIDUE SO4 M 614
15BC6SOFTWAREASP K:1 , LYS N:44 , ARG N:47 , LYS N:50 , HOH N:707BINDING SITE FOR RESIDUE SO4 N 615
16BC7SOFTWAREPHE J:27 , THR J:28 , ASN J:31 , TYR J:32 , HOH J:655 , GLU O:84 , SO4 O:627BINDING SITE FOR RESIDUE SO4 J 616
17BC8SOFTWAREARG K:87 , SER K:88 , GLU K:89 , HOH K:696BINDING SITE FOR RESIDUE SO4 K 617
18BC9SOFTWAREPRO I:14 , ARG I:87 , SER I:88 , GLN L:161BINDING SITE FOR RESIDUE SO4 I 618
19CC1SOFTWAREARG K:30 , ASN K:74BINDING SITE FOR RESIDUE SO4 K 619
20CC2SOFTWAREPHE I:27 , THR I:28 , TYR I:32 , ARG L:66 , HOH L:773BINDING SITE FOR RESIDUE SO4 I 620
21CC3SOFTWARELYS I:215 , ASP I:217 , LYS K:215 , ASP K:217 , HOH K:692BINDING SITE FOR RESIDUE SO4 K 621
22CC4SOFTWARESER M:81 , ARG M:82 , HOH M:685BINDING SITE FOR RESIDUE SO4 M 622
23CC5SOFTWARESER H:130 , VAL H:131 , VAL H:216 , PRO J:129 , THR J:214BINDING SITE FOR RESIDUE SO4 H 623
24CC6SOFTWAREPRO H:129 , THR H:214 , SER J:130 , VAL J:131 , VAL J:216BINDING SITE FOR RESIDUE SO4 J 624
25CC7SOFTWAREARG L:59 , SER L:68 , HOH L:731 , SER O:81BINDING SITE FOR RESIDUE SO4 L 625
26CC8SOFTWARESER K:63 , ARG K:87 , GLU K:89 , SER K:123BINDING SITE FOR RESIDUE SO4 K 626
27CC9SOFTWARESO4 J:616 , PRO O:64 , ASP O:65 , ARG O:66 , ARG O:82BINDING SITE FOR RESIDUE SO4 O 627
28DC1SOFTWAREPRO I:128 , PRO I:129 , VAL K:131 , TYR K:132BINDING SITE FOR RESIDUE GOL I 701
29DC2SOFTWAREARG L:113BINDING SITE FOR RESIDUE GOL L 702
30DC3SOFTWAREARG N:79 , SER N:81 , ARG N:82BINDING SITE FOR RESIDUE GOL N 703
31DC4SOFTWAREHIS H:174 , THR H:175 , ASP L:170 , ASP L:172 , HOH L:757 , HOH L:770BINDING SITE FOR RESIDUE GOL L 704

(-) SS Bonds  (16, 16)

Asymmetric Unit
No.Residues
1H:22 -H:96
2H:150 -H:205
3I:22 -I:96
4I:150 -I:205
5J:22 -J:96
6J:150 -J:205
7K:22 -K:96
8K:150 -K:205
9L:23 -L:93
10L:139 -L:199
11M:23 -M:93
12M:139 -M:199
13N:23 -N:93
14N:139 -N:199
15O:23 -O:93
16O:139 -O:199

(-) Cis Peptide Bonds  (28, 28)

Asymmetric Unit
No.Residues
1Ser L:7 -Pro L:8
2Ile L:99 -Pro L:100
3Tyr L:145 -Pro L:146
4Gln H:141 -Thr H:142
5Phe H:156 -Pro H:157
6Glu H:158 -Pro H:159
7Trp H:198 -Pro H:199
8Ser M:7 -Pro M:8
9Ile M:99 -Pro M:100
10Tyr M:145 -Pro M:146
11Thr M:207 -Ser M:208
12Phe I:156 -Pro I:157
13Glu I:158 -Pro I:159
14Trp I:198 -Pro I:199
15Ser N:7 -Pro N:8
16Ile N:99 -Pro N:100
17Tyr N:145 -Pro N:146
18Phe J:156 -Pro J:157
19Glu J:158 -Pro J:159
20Trp J:198 -Pro J:199
21Ser O:7 -Pro O:8
22Ile O:99 -Pro O:100
23Tyr O:145 -Pro O:146
24Ser K:106 -Pro K:107
25Pro K:136 -Gly K:137
26Phe K:156 -Pro K:157
27Glu K:158 -Pro K:159
28Trp K:198 -Pro K:199

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2AI0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2AI0)

(-) Exons   (0, 0)

(no "Exon" information available for 2AI0)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain H from PDB  Type:PROTEIN  Length:216
 aligned with Q6PIP8_MOUSE | Q6PIP8 from UniProtKB/TrEMBL  Length:464

    Alignment length:218
                                                                                                                                  122                                                                                                                 
                                                                                                                               121  |                                                                                                                 
                                    29        39        49        59        69        79        89        99       109       119 |  |  127       137       147       157       167       177       187       197       207       217       227        
         Q6PIP8_MOUSE    20 EVKLEESGGGLVQPGGSMKLSCVASGFTFSNSWMNWVRQSPEKGLEWVAQIRLRSDNYATHYAESVKGRFTISRDDSKSRLYLQMSSLRAEDTGIYYCTNAM--DYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG 235
               SCOP domains ---------------------------------------------------------------------------------------------------------------------d2ai0h1 H:124-224 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                       SCOP domains
               CATH domains 2ai0H01 H:1-123 Immunoglobulins                                                                                      2ai0H02 H:124-224 Immunoglobulins                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee....--..ee........eeeeeehhh.eeeeee...hhhhheeeeeee.....ee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...eee..eeeeeeeeeee.........eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ai0 H   1 DVKLVESGGGLVKPGGSLRLSCAASGFTFRNYGMSWVRQTPEKRLEWVAAISGNS--LYTSYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHDFFDVWGAGTTVTASSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD 224
                                    10        20        30        40        50    |  |58        68        78        88        98 ||    116       126       136       146       156       166       176       186       196       206       216        
                                                                                 55 56                                         100|                                                                                                                   
                                                                                                                                109                                                                                                                   


Chain I from PDB  Type:PROTEIN  Length:223
 aligned with Q6PIP8_MOUSE | Q6PIP8 from UniProtKB/TrEMBL  Length:464

    Alignment length:225
                                                                                                                                 123        124                                                                                                              
                                    29        39        49        59        69        79        89        99       109       119   |     -    |  129       139       149       159       169       179       189       199       209       219       229     
         Q6PIP8_MOUSE    20 EVKLEESGGGLVQPGGSMKLSCVASGFTFSNSWMNWVRQSPEKGLEWVAQIRLRSDNYATHYAESVKGRFTISRDDSKSRLYLQMSSLRAEDTGIYYCTNAMDY----------WGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR 234
               SCOP domains -----------------------------------------------------------------------------------------------------------------------------d2ai0i1 I:124-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                      SCOP domains
               CATH domains 2ai0I01 I:1-123 Immunoglobulins                                                                                              2ai0I02 I:124-223 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee.....eeeeeee....--..ee........eeeeee....eeeeee...hhhhheeeeeeee.................eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee....eeeeeeeeee.........eeeeee....eeeeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ai0 I   1 DVKLVESGGGLVKPGGSLRLSCAASGFTFRNYGMSWVRQTPEKRLEWVAAISGNS--LYTSYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHDDYYGKSPYFFDVWGAGTTVTASSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR 223
                                    10        20        30        40        50    |  |58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218     
                                                                                 55 56                                                                                                                                                                       


Chain J from PDB  Type:PROTEIN  Length:223
 aligned with Q6PIP8_MOUSE | Q6PIP8 from UniProtKB/TrEMBL  Length:464

    Alignment length:225
                                                                                                                                 123        124                                                                                                              
                                    29        39        49        59        69        79        89        99       109       119   |     -    |  129       139       149       159       169       179       189       199       209       219       229     
         Q6PIP8_MOUSE    20 EVKLEESGGGLVQPGGSMKLSCVASGFTFSNSWMNWVRQSPEKGLEWVAQIRLRSDNYATHYAESVKGRFTISRDDSKSRLYLQMSSLRAEDTGIYYCTNAMDY----------WGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR 234
               SCOP domains -----------------------------------------------------------------------------------------------------------------------------d2ai0j1 J:124-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                      SCOP domains
               CATH domains 2ai0J01 J:1-123 Immunoglobulins                                                                                              2ai0J02 J:124-223 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee....eeeeeeeee..hhhhheeeeeee.....eeeeeee....--..ee.hhhhh..eeeeee....eeeeeee..hhhhheeeeeeeeee..eeeeeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...eee..eeeeeeeeeee.........eeeeeehhhheeeeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ai0 J   1 DVKLVESGGGLVKPGGSLRLSCAASGFTFRNYGMSWVRQTPEKRLEWVAAISGNS--LYTSYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHDDYYGKSPYFFDVWGAGTTVTASSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR 223
                                    10        20        30        40        50    |  |58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218     
                                                                                 55 56                                                                                                                                                                       


Chain K from PDB  Type:PROTEIN  Length:218
 aligned with Q6PIP8_MOUSE | Q6PIP8 from UniProtKB/TrEMBL  Length:464

    Alignment length:220
                                                                                                                               121   122                                                                                                                
                                    29        39        49        59        69        79        89        99       109       119 |     124       134       144       154       164       174       184       194       204       214       224       234
         Q6PIP8_MOUSE    20 EVKLEESGGGLVQPGGSMKLSCVASGFTFSNSWMNWVRQSPEKGLEWVAQIRLRSDNYATHYAESVKGRFTISRDDSKSRLYLQMSSLRAEDTGIYYCTNAM-----DYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR 234
               SCOP domains ------------------------------------------------------------------------------------------------------------------------d2ai0k1 K:124-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                      SCOP domains
               CATH domains 2ai0K01 K:1-123 Immunoglobulins                                                                                         2ai0K02 K:124-223 Immunoglobulins                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee....--..ee.........eeeeehhh.eeeeee...hhhhheeeeeeee.....eeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...eee..eeeeeeeeeee.........eeeeeehhh.eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ai0 K   1 DVKLVESGGGLVKPGGSLRLSCAASGFTFRNYGMSWVRQTPEKRLEWVAAISGNS--LYTSYPDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHDSPYFFDVWGAGTTVTASSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR 223
                                    10        20        30        40        50    |  |58        68        78        88        98 ||    113       123       133       143       153       163       173       183       193       203       213       223
                                                                                 55 56                                         100|                                                                                                                     
                                                                                                                                106                                                                                                                     


Chain L from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains d2ai0l1 L:1-113 automated matches                                                                                d2ai0l2 L:114-217 automated matches                                                                      SCOP domains
               CATH domains 2ai0L01 L:1-113 Immunoglobulins                                                                                  -2ai0L02 L:115-214 Immunoglobulins                                                                   --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee......eeeee...ee.......eeeee...eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ai0 L   1 DVLMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGRSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLESKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN 217
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       


Chain M from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains d2ai0m1 M:1-113 automated matches                                                                                d2ai0m2 M:114-217 automated matches                                                                   SCOP domains
               CATH domains 2ai0M01 M:1-113 Immunoglobulins                                                                                  -2ai0M02 M:115-214 Immunoglobulins                                                                --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhh..eeeeeee....eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ai0 M   1 DVLMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGRSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLESKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHTSPIVKSFNRN 217
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200  ||   213    
                                                                                                                                                                                                                                    203|          
                                                                                                                                                                                                                                     207          


Chain N from PDB  Type:PROTEIN  Length:216
                                                                                                                                                                                                                                                        
               SCOP domains d2ai0n1 N:1-113 automated matches                                                                                d2ai0n2 N:114-216 automated matches                                                                     SCOP domains
               CATH domains 2ai0N01 N:1-113 Immunoglobulins                                                                                  -2ai0N02 N:115-214 Immunoglobulins                                                                   -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2ai0 N   1 DVLMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGRSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLESKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR 216
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210      


Chain O from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains d2ai0o1 O:1-113 automated matches                                                                                d2ai0o2 O:114-217 automated matches                                                                      SCOP domains
               CATH domains 2ai0O01 O:1-113 Immunoglobulins                                                                                  -2ai0O02 O:115-214 Immunoglobulins                                                                   --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ai0 O   1 DVLMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGRSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLESKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN 217
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 12)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 16)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)
(-)
Architecture: Sandwich (5577)
(-)
Topology: Immunoglobulin-like (3897)
(-)
Homologous Superfamily: Immunoglobulins (2282)
(-)
House mouse (Mus musculus) (616)
1a2ai0L02L:115-214
1b2ai0H02H:124-224
1c2ai0I02I:124-223
1d2ai0J02J:124-223
1e2ai0K02K:124-223
1f2ai0L01L:1-113
1g2ai0M01M:1-113
1h2ai0N01N:1-113
1i2ai0O01O:1-113
1j2ai0H01H:1-123
1k2ai0K01K:1-123
1l2ai0I01I:1-123
1m2ai0J01J:1-123
1n2ai0N02N:115-214
1o2ai0O02O:115-214
1p2ai0M02M:115-214

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2AI0)

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    (no "Gene Ontology" information available for 2AI0)

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        Q6PIP8_MOUSE | Q6PIP8: 2ipt 2r2h 3j42 4kvc 4pb0

(-) Related Entries Specified in the PDB File

2a1w CRYSTAL FORM I
2a77 CRYSTAL FORM II