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(-) Description

Title :  3-OXOACYL-[ACYL CARRIER PROTEIN] REDUCTASE FROM THERMUS THERMOPHILUS TT0137
 
Authors :  W. Zhou, A. Ebihara, W. Tempel, S. Yokoyama, L. Chen, S. Kuramitsu, J. Ng H. Chang, Z. -J. Liu, J. P. Rose, B. -C. Wang, Southeast Collaboratory Structural Genomics (Secsg), Riken Structural Genomics/Prote Initiative (Rsgi)
Date :  29 Jun 05  (Deposition) - 10 Jan 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Reductase, Hyperthermophile, Structural Genomics, Psi, Protein Structure Initiative, Southeast Collaboratory For Structural Genomics, Secsg, Riken Structural Genomics/Proteomics Initiative, Rsgi, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Zhou, A. Ebihara, W. Tempel, S. Yokoyama, L. Chen, S. Kuramitsu, J. Nguyen, S. -H. Chang, Z. -J. Liu, J. P. Rose, B. -C. Wang
3-Oxoacyl-[Acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - 3-OXOACYL-[ACYL CARRIER PROTEIN] REDUCTASE
    Chains: A, B
    EC Number: 1.1.1.100
    Engineered: YES
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 274

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 28)

Asymmetric/Biological Unit (1, 28)
No.NameCountTypeFull Name
1UNX28Ligand/IonUNKNOWN ATOM OR ION

(-) Sites  (19, 19)

Asymmetric Unit (19, 19)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS B:86 , ALA B:88 , ASN B:111 , GLY B:114 , SER B:115BINDING SITE FOR RESIDUE UNX B 264
02AC2SOFTWARESER B:16 , PHE B:87 , VAL B:90BINDING SITE FOR RESIDUE UNX B 265
03AC3SOFTWAREGLY B:155 , VAL B:156BINDING SITE FOR RESIDUE UNX B 266
04AC4SOFTWAREASP B:24BINDING SITE FOR RESIDUE UNX B 267
05AC5SOFTWAREGLU B:196BINDING SITE FOR RESIDUE UNX B 268
06AC6SOFTWAREVAL A:90 , HIS A:92 , SER A:93BINDING SITE FOR RESIDUE UNX A 264
07AC7SOFTWARELYS B:65 , GLU B:68BINDING SITE FOR RESIDUE UNX B 270
08AC8SOFTWAREILE B:55 , ALA B:56BINDING SITE FOR RESIDUE UNX A 267
09AC9SOFTWAREGLU B:77 , PHE B:78 , GLY B:79BINDING SITE FOR RESIDUE UNX A 268
10BC1SOFTWAREHIS A:148 , GLY A:155 , GLU B:76 , GLU B:77BINDING SITE FOR RESIDUE UNX A 269
11BC2SOFTWARELEU B:181BINDING SITE FOR RESIDUE UNX B 271
12BC3SOFTWARELEU B:117BINDING SITE FOR RESIDUE UNX B 272
13BC4SOFTWAREGLY B:17BINDING SITE FOR RESIDUE UNX B 274
14BC5SOFTWAREARG B:20 , ALA B:46BINDING SITE FOR RESIDUE UNX B 275
15BC6SOFTWAREALA B:56BINDING SITE FOR RESIDUE UNX A 272
16BC7SOFTWAREALA A:56BINDING SITE FOR RESIDUE UNX A 274
17BC8SOFTWAREGLU A:40 , ARG A:41BINDING SITE FOR RESIDUE UNX A 275
18BC9SOFTWARELEU A:108 , ASN A:111BINDING SITE FOR RESIDUE UNX A 276
19CC1SOFTWAREARG B:28 , GLU B:29 , GLY B:30BINDING SITE FOR RESIDUE UNX B 276

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2A4K)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2A4K)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2A4K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2A4K)

(-) Exons   (0, 0)

(no "Exon" information available for 2A4K)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:237
                                                                                                                                                                                                                                                                             
               SCOP domains d2a4ka1 A:2-242 beta-keto acyl carrier protein reductase                                                                                                                                                                                      SCOP domains
               CATH domains 2a4kA00 A:2-242 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                                           CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh...eeee.hhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee......hhhhhhhhhhh.hhhhhhhhhhhhhhh....eeeeeee....hhhhh..hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....eeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2a4k A   2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSIV 242
                                    11        21        31        41        51        61        71        81        91   ||  105       115       125       135       145       155       165       175       185       195       205       215       225       235       
                                                                                                                        95|                                                                                                                                              
                                                                                                                        100                                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:202
                                                                                                                                                                                                                                          
               SCOP domains d2a4kb_ B: beta-keto acyl carrier protein reductase                                                                                                                                                        SCOP domains
               CATH domains 2a4kB01 B:3-236 NAD(P)-binding Rossmann-like Domain                                                                                                                                                 ------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee...hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee..hhhhhhhhhhhhhhhhhh.eeeeeee......hhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2a4k B   3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGKLGVVGLARTLALELARKGVRVNVLLPGLIQAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSIV 242
                                    12        22        32        42        52        62        72        82       104       114       124       134 ||    160       170       180  ||   200       210       220       230       240  
                                                                                                                   91|                             136|                           183|                                                
                                                                                                                   104                              153                            194
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2A4K)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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