2Y8F - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   STRUCTURE OF THE RAN-BINDING DOMAIN FROM HUMAN RANBP3 (WILD TYPE)

Authors :   K. Langer, C. Dian, V. Rybin, C. W. Muller, C. Petosa

Date :   06 Feb 11 (Deposition) - 16 Feb 11 (Release) - 16 Mar 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)

Keywords :   Protein Transport, Crm1-Mediated Nuclear Export (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Langer, C. Dian, V. Rybin, C. W. Muller, C. Petosa
Insights Into The Function Of The Crm1 Cofactor Ranbp3 From The Structure Of Its Ran-Binding Domain
Plos One V. 6 17011 2011
PubMed-ID: 21364925 | Reference-DOI: 10.1371/JOURNAL.PONE.0017011

Molecule 1 - RAN-BINDING PROTEIN 3
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PETM11
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	RAN BINDING DOMAIN, RESIDUES 320-454
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Other Details	:	ISOFORM3
	Synonym	:	RANBP3-B

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 7)

No.	Name	Count	Type	Full Name
1	CL	1	Ligand/Ion	CHLORIDE ION
2	GOL	6	Ligand/Ion	GLYCEROL

Biological Unit 1 (1, 3)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	3	Ligand/Ion	GLYCEROL

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	-1	Ligand/Ion	GLYCEROL

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	1	Ligand/Ion	GLYCEROL

Biological Unit 4 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	2	Ligand/Ion	GLYCEROL

Asymmetric Unit (7, 7)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:390 , MET A:410	BINDING SITE FOR RESIDUE CL A1449
2	AC2	SOFTWARE	SER A:331 , ASP A:362 , THR A:370 , ILE D:397 , TYR D:433 , HIS D:437 , ARG D:444	BINDING SITE FOR RESIDUE GOL A1450
3	AC3	SOFTWARE	HIS A:438 , TRP D:392 , HOH D:2052	BINDING SITE FOR RESIDUE GOL A1451
4	AC4	SOFTWARE	MET A:395 , GLN A:396 , ILE A:397 , ARG A:444	BINDING SITE FOR RESIDUE GOL A1452
5	AC5	SOFTWARE	PHE C:343 , LYS C:345 , LYS C:418 , VAL C:419	BINDING SITE FOR RESIDUE GOL C1448
6	AC6	SOFTWARE	SER A:445 , VAL A:447 , TRP D:350 , ARG D:406	BINDING SITE FOR RESIDUE GOL D1455
7	AC7	SOFTWARE	ARG A:359 , ARG A:378 , ASN D:332 , VAL D:333 , LEU D:334 , GLN D:335	BINDING SITE FOR RESIDUE GOL D1456

(no "SS Bond" information available for 2Y8F)

(no "Cis Peptide Bond" information available for 2Y8F)

(no "SAP(SNP)/Variant" information available for 2Y8F)

Asymmetric Unit (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RANBD1	PS50196	Ran binding domain type 1 profile.	RANB3_HUMAN	385-466	1	D:320-398

Biological Unit 1 (, 0)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RANBD1	PS50196	Ran binding domain type 1 profile.	RANB3_HUMAN	385-466	0	-

Biological Unit 2 (, 0)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RANBD1	PS50196	Ran binding domain type 1 profile.	RANB3_HUMAN	385-466	0	-

Biological Unit 3 (, 0)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RANBD1	PS50196	Ran binding domain type 1 profile.	RANB3_HUMAN	385-466	0	-

Biological Unit 4 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RANBD1	PS50196	Ran binding domain type 1 profile.	RANB3_HUMAN	385-466	1	D:320-398

Asymmetric Unit (4, 16)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000340578	1	ENSE00001428577	chr19:5978320-5978072	249	RANB3_HUMAN	1-8	8	0	-	-
1.3b	ENST00000340578	3b	ENSE00001115985	chr19:5957984-5957929	56	RANB3_HUMAN	8-26	19	0	-	-
1.4	ENST00000340578	4	ENSE00001115983	chr19:5951607-5951404	204	RANB3_HUMAN	27-94	68	0	-	-
1.5	ENST00000340578	5	ENSE00001306174	chr19:5941846-5941810	37	RANB3_HUMAN	95-107	13	0	-	-
1.6	ENST00000340578	6	ENSE00000666160	chr19:5941718-5941632	87	RANB3_HUMAN	107-136	30	0	-	-
1.7	ENST00000340578	7	ENSE00000666161	chr19:5933490-5933425	66	RANB3_HUMAN	136-158	23	0	-	-
1.8	ENST00000340578	8	ENSE00000666162	chr19:5932555-5932463	93	RANB3_HUMAN	158-189	32	0	-	-
1.9b	ENST00000340578	9b	ENSE00000666163	chr19:5931542-5931415	128	RANB3_HUMAN	189-231	43	0	-	-
1.10	ENST00000340578	10	ENSE00001246903	chr19:5928098-5927979	120	RANB3_HUMAN	232-271	40	0	-	-
1.11	ENST00000340578	11	ENSE00001246896	chr19:5925748-5925645	104	RANB3_HUMAN	272-306	35	0	-	-
1.12	ENST00000340578	12	ENSE00000666166	chr19:5924916-5924838	79	RANB3_HUMAN	306-332	27	0	-	-
1.13	ENST00000340578	13	ENSE00001246887	chr19:5923925-5923823	103	RANB3_HUMAN	333-367	35	0	-	-
1.14	ENST00000340578	14	ENSE00001246883	chr19:5923314-5923205	110	RANB3_HUMAN	367-403	37	4	A:322-335 B:330-335 C:330-335 D:318-335	14 6 6 18
1.15b	ENST00000340578	15b	ENSE00001246878	chr19:5921332-5921212	121	RANB3_HUMAN	404-444	41	4	A:336-376 B:336-376 (gaps) C:336-376 (gaps) D:336-376 (gaps)	41 41 41 41
1.16	ENST00000340578	16	ENSE00000666170	chr19:5918649-5918507	143	RANB3_HUMAN	444-491	48	4	A:376-423 B:376-423 (gaps) C:376-423 D:376-423	48 48 48 48
1.17	ENST00000340578	17	ENSE00000666171	chr19:5917991-5917805	187	RANB3_HUMAN	492-554	63	4	A:424-448 B:424-450 C:424-447 D:424-454	25 27 24 31
1.18a	ENST00000340578	18a	ENSE00001370280	chr19:5917664-5916154	1511	RANB3_HUMAN	554-567	14	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:127
 aligned with RANB3_HUMAN | Q9H6Z4 from UniProtKB/Swiss-Prot  Length:567

    Alignment length:127
                                   399       409       419       429       439       449       459       469       479       489       499       509       
          RANB3_HUMAN   390 EVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVE 516
               SCOP domains d2y8fa_ A: automated matches                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeeeeeeeeee....eeeeeeeeeeeeeeee.....eeeeeeeeee.....eeeeee......eeeee..eeeeeee......eeeeeee.hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE RANBD1  PDB: - UniProt: 385-466                                              -------------------------------------------------- PROSITE
           Transcript 1 (1) --------------Exon 1.15b  PDB: A:336-376               -----------------------------------------------Exon 1.17  PDB: A:424-448 Transcript 1 (1)
           Transcript 1 (2) Exon 1.14     ----------------------------------------Exon 1.16  PDB: A:376-423 UniProt: 444-491      ------------------------- Transcript 1 (2)
                 2y8f A 322 EVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVE 448
                                   331       341       351       361       371       381       391       401       411       421       431       441

Chain B from PDB  Type:PROTEIN  Length:112
 aligned with RANB3_HUMAN | Q9H6Z4 from UniProtKB/Swiss-Prot  Length:567

    Alignment length:121
                                   407       417       427       437       447       457       467       477       487       497       507       517 
          RANB3_HUMAN   398 ESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQE 518
               SCOP domains d2y8fb_ B: automated matches                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeee....eeeeeeeeeeeeee.-------..eeeeeee.....eeeeee......eeeee..eeeeeee..--..eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE RANBD1  PDB: - UniProt: 385-466                                      ---------------------------------------------------- PROSITE
           Transcript 1 (1) ------Exon 1.15b  PDB: B:336-376 (gaps)        -----------------------------------------------Exon 1.17  PDB: B:424-450   Transcript 1 (1)
           Transcript 1 (2) 1.14  ----------------------------------------Exon 1.16  PDB: B:376-423 (gaps)                --------------------------- Transcript 1 (2)
                 2y8f B 330 ESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDM-------LQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDT--QGVKVFLISASSKDTGQLYAALHHRILALRSRVEQE 450
                                   339       349       359   |     - |     379       389       399       409  |  | 419       429       439       449 
                                                           363     371                                      412  |                                   
                                                                                                               415

Chain C from PDB  Type:PROTEIN  Length:114
 aligned with RANB3_HUMAN | Q9H6Z4 from UniProtKB/Swiss-Prot  Length:567

    Alignment length:118
                                   407       417       427       437       447       457       467       477       487       497       507        
          RANB3_HUMAN   398 ESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRV 515
               SCOP domains d2y8fc_ C: automated matches                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeee....eeeeeeeeeeeeeee.----...eeeeeeee.....eeeeee......eeeee..eeeeeee......eeeeeee.hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE RANBD1  PDB: - UniProt: 385-466                                      ------------------------------------------------- PROSITE
           Transcript 1 (1) ------Exon 1.15b  PDB: C:336-376 (gaps)        -----------------------------------------------Exon 1.17  PDB: C:424-44 Transcript 1 (1)
           Transcript 1 (2) 1.14  ----------------------------------------Exon 1.16  PDB: C:376-423 UniProt: 444-491      ------------------------ Transcript 1 (2)
                 2y8f C 330 ESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMA----GTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRV 447
                                   339       349       359    |  369       379       389       399       409       419       429       439        
                                                            364  369

Chain D from PDB  Type:PROTEIN  Length:133
 aligned with RANB3_HUMAN | Q9H6Z4 from UniProtKB/Swiss-Prot  Length:567

    Alignment length:169
                                   363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513         
          RANB3_HUMAN   354 GSESSSQEATPEKESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEAK 522
               SCOP domains d                               2y8fd_ D: automated matches                                                                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -                               ----Ran_BP1-2y8fD01 D:322-437                                                                                           ----------------- Pfam domains (1)
           Pfam domains (2) -                               ----Ran_BP1-2y8fD02 D:322-437                                                                                           ----------------- Pfam domains (2)
           Pfam domains (3) -                               ----Ran_BP1-2y8fD03 D:322-437                                                                                           ----------------- Pfam domains (3)
           Pfam domains (4) -                               ----Ran_BP1-2y8fD04 D:322-437                                                                                           ----------------- Pfam domains (4)
         Sec.struct. author .-------------------------------...hhhhhh....eeeeeeeeeeeeee....eeeeeeeeeeeeeee.-----..eeeeeeee.....eeeeee......eeeee..eeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------RANBD1  PDB: D:320-398 UniProt: 385-466                                           -------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.13     ------------------------------------Exon 1.15b  PDB: D:336-376 (gaps)        -----------------------------------------------Exon 1.17  PDB: D:424-454       Transcript 1 (1)
           Transcript 1 (2) -------------Exon 1.14  PDB: D:318-335            ----------------------------------------Exon 1.16  PDB: D:376-423 UniProt: 444-491      ------------------------------- Transcript 1 (2)
                 2y8f D 317 G-------------------------------AMKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMA-----TLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEAK 454
                            |        -         -         -  |    325       335       345       355        |-    |  375       385       395       405       415       425       435       445         
                          317                             318                                           364   370

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: PH domain-like barrel (258)

Superfamily: PH domain-like (257)

Family: Ran-binding domain (7)

Protein domain: automated matches (2)

Human (Homo sapiens) [TaxId: 9606] (2)

1a	d2y8fa_	A:
1b	d2y8fb_	B:
1c	d2y8fc_	C:
1d	d2y8fd_	D:

(no "CATH Domain" information available for 2Y8F)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: PH (111)

Family: Ran_BP1 (9)

Homo sapiens (Human) (6)

1a	Ran_BP1-2y8fD01	D:322-437
1b	Ran_BP1-2y8fD02	D:322-437
1c	Ran_BP1-2y8fD03	D:322-437
1d	Ran_BP1-2y8fD04	D:322-437

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (RANB3_HUMAN | Q9H6Z4)

molecular function
	GO:0070412	R-SMAD binding	Interacting selectively and non-covalently with a receptor-regulated SMAD signaling protein.
	GO:0008536	Ran GTPase binding	Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0046907	intracellular transport	The directed movement of substances within a cell.
	GO:0046827	positive regulation of protein export from nucleus	Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm.
	GO:0015031	protein transport	The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005654	nucleoplasm	That part of the nuclear content other than the chromosomes or the nucleolus.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		CL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2y8f)

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]
		Biological Unit 4	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format \| Biol. Unit 4 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	2y8f
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	RANB3_HUMAN \| Q9H6Z4
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	RANB3_HUMAN \| Q9H6Z4
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	RANB3_HUMAN \| Q9H6Z4	:	2crf 2y8g

2crf	SOLUTION STRUCTURE OF THE RAN_BP1 DOMAIN OF RAN- BINDINGPROTEIN-3
2y8g	STRUCTURE OF THE RAN-BINDING DOMAIN FROM HUMAN RANBP3 (E352A-R353V DOUBLE MUTANT)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 7)

Sites (7, 7)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (4, 16)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (0, 0)

Pfam Domains (1, 4)

Gene Ontology (11, 11)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File