Chain A from PDB Type:PROTEIN Length:165
aligned with MS3L1_HUMAN | Q8N5Y2 from UniProtKB/Swiss-Prot Length:521
Alignment length:337
180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
MS3L1_HUMAN 171 TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVHYIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSESSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTNEINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA 507
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhhhhhhh..---------------------...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh-------------------------------------------------------------------------------------------------------------------------------------------------------......hhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.ee.. Sec.struct. author
SAPs(SNPs) ----------------------------Q---------------------------------------------------I---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2y0n A 171 TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSA---------------------AEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSS-------------------------------------------------------------------------------------------------------------------------------------------------------EFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA 507
180 190 200 210 220 | - - |250 260 270 280 | - - - - - - - - - - - - - - - 440 450 460 470 480 490 500
225 247 288 440
Chain B from PDB Type:PROTEIN Length:165
aligned with MS3L1_HUMAN | Q8N5Y2 from UniProtKB/Swiss-Prot Length:521
Alignment length:337
180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
MS3L1_HUMAN 171 TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVHYIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSESSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTNEINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA 507
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhhhhhhh..---------------------...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh-------------------------------------------------------------------------------------------------------------------------------------------------------......hhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.ee.. Sec.struct. author
SAPs(SNPs) ----------------------------Q---------------------------------------------------I---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2y0n B 171 TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSA---------------------AEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSS-------------------------------------------------------------------------------------------------------------------------------------------------------EFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA 507
180 190 200 210 220 | - - |250 260 270 280 | - - - - - - - - - - - - - - - 440 450 460 470 480 490 500
225 247 288 440
Chain C from PDB Type:PROTEIN Length:164
aligned with MS3L1_HUMAN | Q8N5Y2 from UniProtKB/Swiss-Prot Length:521
Alignment length:337
180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
MS3L1_HUMAN 171 TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVHYIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSESSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTNEINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA 507
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhhhhhhh----------------------....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh-------------------------------------------------------------------------------------------------------------------------------------------------------......hhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.ee.. Sec.struct. author
SAPs(SNPs) ----------------------------Q---------------------------------------------------I---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2y0n C 171 TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAF----------------------PAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSS-------------------------------------------------------------------------------------------------------------------------------------------------------EFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA 507
180 190 200 210 220 | - - | 250 260 270 280 | - - - - - - - - - - - - - - - 440 450 460 470 480 490 500
223 246 288 440
Chain D from PDB Type:PROTEIN Length:164
aligned with MS3L1_HUMAN | Q8N5Y2 from UniProtKB/Swiss-Prot Length:521
Alignment length:337
180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
MS3L1_HUMAN 171 TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVHYIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSESSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTNEINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA 507
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) MRG-2y0nD01 D:171-504 --- Pfam domains (1)
Pfam domains (2) MRG-2y0nD02 D:171-504 --- Pfam domains (2)
Pfam domains (3) MRG-2y0nD03 D:171-504 --- Pfam domains (3)
Pfam domains (4) MRG-2y0nD04 D:171-504 --- Pfam domains (4)
Sec.struct. author ......hhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhhhhhhh----------------------....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh-------------------------------------------------------------------------------------------------------------------------------------------------------......hhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.ee.. Sec.struct. author
SAPs(SNPs) ----------------------------Q---------------------------------------------------I---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2y0n D 171 TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAF----------------------PAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSS-------------------------------------------------------------------------------------------------------------------------------------------------------EFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA 507
180 190 200 210 220 | - - | 250 260 270 280 | - - - - - - - - - - - - - - - 440 450 460 470 480 490 500
223 246 288 440
Chain E from PDB Type:PROTEIN Length:39
aligned with MSL1_MOUSE | Q6PDM1 from UniProtKB/Swiss-Prot Length:616
Alignment length:44
560 570 580 590
MSL1_MOUSE 551 PEVTSFFPEPDDVESLLITPFLPVVAFGRPLPKLAPQNFELPWL 594
SCOP domains -------------------------------------------- SCOP domains
CATH domains -------------------------------------------- CATH domains
Pfam domains -------------------------------------------- Pfam domains
Sec.struct. author ........-----...........ee..ee.............. Sec.struct. author
SAPs(SNPs) -------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------- PROSITE
Transcript -------------------------------------------- Transcript
2y0n E 551 PEVTSFFP-----ESLLITPFLPVVAFGRPLPKLAPQNFELPWL 594
| - | 570 580 590
558 564
Chain F from PDB Type:PROTEIN Length:36
aligned with MSL1_MOUSE | Q6PDM1 from UniProtKB/Swiss-Prot Length:616
Alignment length:41
562 572 582 592
MSL1_MOUSE 553 VTSFFPEPDDVESLLITPFLPVVAFGRPLPKLAPQNFELPW 593
SCOP domains ----------------------------------------- SCOP domains
CATH domains ----------------------------------------- CATH domains
Pfam domains ----------------------------------------- Pfam domains
Sec.struct. author ......-----...........ee..ee............. Sec.struct. author
SAPs(SNPs) ----------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------- PROSITE
Transcript ----------------------------------------- Transcript
2y0n F 553 VTSFFP-----ESLLITPFLPVVAFGRPLPKLAPQNFELPW 593
| - | 572 582 592
558 564
Chain G from PDB Type:PROTEIN Length:29
aligned with MSL1_MOUSE | Q6PDM1 from UniProtKB/Swiss-Prot Length:616
Alignment length:38
562 572 582
MSL1_MOUSE 553 VTSFFPEPDDVESLLITPFLPVVAFGRPLPKLAPQNFE 590
SCOP domains -------------------------------------- SCOP domains
CATH domains -------------------------------------- CATH domains
Pfam domains -------------------------------------- Pfam domains
Sec.struct. author ......---------.......ee..ee.......... Sec.struct. author
SAPs(SNPs) -------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------- PROSITE
Transcript -------------------------------------- Transcript
2y0n G 553 VTSFFP---------ITPFLPVVAFGRPLPKLAPQNFE 590
| - | 572 582
558 568
Chain H from PDB Type:PROTEIN Length:29
aligned with MSL1_MOUSE | Q6PDM1 from UniProtKB/Swiss-Prot Length:616
Alignment length:38
562 572 582
MSL1_MOUSE 553 VTSFFPEPDDVESLLITPFLPVVAFGRPLPKLAPQNFE 590
SCOP domains -------------------------------------- SCOP domains
CATH domains -------------------------------------- CATH domains
Pfam domains -------------------------------------- Pfam domains
Sec.struct. author ......---------.......ee..ee.......... Sec.struct. author
SAPs(SNPs) -------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------- PROSITE
Transcript -------------------------------------- Transcript
2y0n H 553 VTSFFP---------ITPFLPVVAFGRPLPKLAPQNFE 590
| - | 572 582
558 568
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |