2XE5 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   MOLECULAR INSIGHTS INTO CLINICALLY ISOLATED OMPC MUTANTS AND THEIR ROLE IN MULTI-DRUG RESISTANCE (OMPC26)

Authors :   V. A. Bamford, J. H. Naismith

Date :   11 May 10 (Deposition) - 26 May 10 (Release) - 16 Nov 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.28

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: D,E,F  (1x)
Biol. Unit 2: A,B,C  (1x)

Keywords :   Cell Membrane, Transport Protein, Ion Transport, Porin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. Lou, M. Chen, S. S. Black, S. R. Bushell, M. Ceccarelli, T. Mach, K. Beis, A. S. Low, V. A. Bamford, I. R. Booth, H. Bayley, J. H. Naismith
Altered Antibiotic Transport In Ompc Mutants Isolated From A Series Of Clinical Strains Of Multi-Drug Resistant E. Coli.
Plos One V. 6 25825 2011
PubMed-ID: 22053181 | Reference-DOI: 10.1371/JOURNAL.PONE.0025825

Molecule 1 - OUTER MEMBRANE PORIN C
	Chains	:	A, B, C, D, E, F
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562
	Other Details	:	OMPC26 ISOLATED FROM CLINICAL MUTANTS
	Strain	:	O6
	Synonym	:	OUTER MEMBRANE PROTEIN C, OMPC

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:				D	E	F
Biological Unit 2 (1x)	:	A	B	C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (9, 47)

No.	Name	Count	Type	Full Name
1	ASZ	1	Ligand/Ion	2-(DIMETHYLAMINO)ETHANESULFONIC ACID
2	C8E	3	Ligand/Ion	(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
3	D10	6	Ligand/Ion	DECANE
4	D12	6	Ligand/Ion	DODECANE
5	HEX	10	Ligand/Ion	HEXANE
6	HP6	3	Ligand/Ion	HEPTANE
7	OCT	10	Ligand/Ion	N-OCTANE
8	OES	2	Ligand/Ion	N-OCTYL-2-HYDROXYETHYL SULFOXIDE
9	SO4	6	Ligand/Ion	SULFATE ION

Biological Unit 1 (7, 17)

No.	Name	Count	Type	Full Name
1	ASZ	-1	Ligand/Ion	2-(DIMETHYLAMINO)ETHANESULFONIC ACID
2	C8E	1	Ligand/Ion	(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
3	D10	-1	Ligand/Ion	DECANE
4	D12	4	Ligand/Ion	DODECANE
5	HEX	2	Ligand/Ion	HEXANE
6	HP6	2	Ligand/Ion	HEPTANE
7	OCT	4	Ligand/Ion	N-OCTANE
8	OES	1	Ligand/Ion	N-OCTYL-2-HYDROXYETHYL SULFOXIDE
9	SO4	3	Ligand/Ion	SULFATE ION

Biological Unit 2 (9, 30)

No.	Name	Count	Type	Full Name
1	ASZ	1	Ligand/Ion	2-(DIMETHYLAMINO)ETHANESULFONIC ACID
2	C8E	2	Ligand/Ion	(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
3	D10	6	Ligand/Ion	DECANE
4	D12	2	Ligand/Ion	DODECANE
5	HEX	8	Ligand/Ion	HEXANE
6	HP6	1	Ligand/Ion	HEPTANE
7	OCT	6	Ligand/Ion	N-OCTANE
8	OES	1	Ligand/Ion	N-OCTYL-2-HYDROXYETHYL SULFOXIDE
9	SO4	3	Ligand/Ion	SULFATE ION

Asymmetric Unit (39, 39)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	TYR A:235 , GLN A:254 , LYS A:278 , PHE B:23 , D12 C:1346	BINDING SITE FOR RESIDUE C8E A1344
02	AC2	SOFTWARE	D12 A:1346	BINDING SITE FOR RESIDUE HEX A1345
03	AC3	SOFTWARE	TYR A:313 , ASP A:333 , HEX A:1345	BINDING SITE FOR RESIDUE D12 A1346
04	AC4	SOFTWARE	THR A:219 , GLY A:220 , TYR C:149 , HEX C:1344	BINDING SITE FOR RESIDUE OCT A1347
05	AC5	SOFTWARE	LYS A:16 , TYR A:35 , ARG A:37 , SO4 A:1349 , HOH A:2086 , HOH A:2087	BINDING SITE FOR RESIDUE SO4 A1348
06	AC6	SOFTWARE	ARG A:37 , ARG A:74 , ARG A:124 , SO4 A:1348	BINDING SITE FOR RESIDUE SO4 A1349
07	AC7	SOFTWARE	LEU A:317 , ILE B:315	BINDING SITE FOR RESIDUE HEX A1350
08	AC8	SOFTWARE	TYR A:218	BINDING SITE FOR RESIDUE OCT A1351
09	AC9	SOFTWARE	ALA A:232	BINDING SITE FOR RESIDUE D10 B1344
10	BC1	SOFTWARE	TYR E:90 , ASP E:175	BINDING SITE FOR RESIDUE D10 B1345
11	BC2	SOFTWARE	VAL E:295 , ILE F:315	BINDING SITE FOR RESIDUE D10 B1346
12	BC3	SOFTWARE	VAL C:85 , GLY C:86	BINDING SITE FOR RESIDUE D10 B1347
13	BC4	SOFTWARE	TYR A:274 , LYS A:278 , HOH A:2064 , VAL B:335	BINDING SITE FOR RESIDUE D10 B1348
14	BC5	SOFTWARE	LYS B:293	BINDING SITE FOR RESIDUE D10 B1349
15	BC6	SOFTWARE	LYS B:16 , TYR B:35 , ARG B:37 , ARG B:74 , GLN B:123 , ARG B:124 , HOH B:2040	BINDING SITE FOR RESIDUE ASZ B1350
16	BC7	SOFTWARE	VAL B:297	BINDING SITE FOR RESIDUE C8E B1351
17	BC8	SOFTWARE	TYR B:149 , ASP B:175 , GLY B:176	BINDING SITE FOR RESIDUE OES B1352
18	BC9	SOFTWARE	LYS B:252 , GLN B:254 , ASN F:281	BINDING SITE FOR RESIDUE HEX B1353
19	CC1	SOFTWARE	LEU B:339	BINDING SITE FOR RESIDUE HP6 B1354
20	CC2	SOFTWARE	VAL B:295 , LEU B:317	BINDING SITE FOR RESIDUE OCT B1358
21	CC3	SOFTWARE	OCT A:1347 , TYR C:131	BINDING SITE FOR RESIDUE HEX C1344
22	CC4	SOFTWARE	GLN C:237	BINDING SITE FOR RESIDUE HEX C1345
23	CC5	SOFTWARE	GLY A:191 , GLY A:220 , GLY A:221 , C8E A:1344 , TYR C:131 , TYR C:149	BINDING SITE FOR RESIDUE D12 C1346
24	CC6	SOFTWARE	LYS C:16 , TYR C:35 , ARG C:37 , HOH C:2003	BINDING SITE FOR RESIDUE SO4 C1348
25	CC7	SOFTWARE	TYR C:183	BINDING SITE FOR RESIDUE HEX C1350
26	CC8	SOFTWARE	TYR D:90 , TYR D:149 , GLN D:150 , GLY D:151 , GLY D:176 , VAL D:177	BINDING SITE FOR RESIDUE C8E D1344
27	CC9	SOFTWARE	LEU D:80 , LYS D:81 , PHE D:82 , VAL D:85 , TYR D:131 , PHE D:145 , ILE E:190	BINDING SITE FOR RESIDUE OES D1345
28	DC1	SOFTWARE	TYR D:131 , TYR D:149 , GLY E:220 , GLY E:221	BINDING SITE FOR RESIDUE OCT D1347
29	DC2	SOFTWARE	GLN D:123 , ARG D:124 , HOH D:2070	BINDING SITE FOR RESIDUE SO4 D1348
30	DC3	SOFTWARE	LYS E:278 , LYS E:280 , ASP E:290	BINDING SITE FOR RESIDUE HEX E1344
31	DC4	SOFTWARE	ALA E:233 , PHE F:23	BINDING SITE FOR RESIDUE D12 E1345
32	DC5	SOFTWARE	LYS E:223 , TYR E:224 , LEU E:231 , VAL E:259	BINDING SITE FOR RESIDUE D12 E1346
33	DC6	SOFTWARE	ILE E:315	BINDING SITE FOR RESIDUE D12 E1347
34	DC7	SOFTWARE	LEU E:337	BINDING SITE FOR RESIDUE OCT E1348
35	DC8	SOFTWARE	ASN B:281 , GLN F:237 , TYR F:239	BINDING SITE FOR RESIDUE HEX F1344
36	DC9	SOFTWARE	LEU F:317	BINDING SITE FOR RESIDUE HP6 F1345
37	EC1	SOFTWARE	TYR E:274 , GLN E:276 , VAL F:335	BINDING SITE FOR RESIDUE OCT F1347
38	EC2	SOFTWARE	ARG F:37 , ARG F:74 , GLN F:123 , ARG F:124 , SO4 F:1349	BINDING SITE FOR RESIDUE SO4 F1348
39	EC3	SOFTWARE	LYS F:16 , TYR F:35 , ARG F:37 , SO4 F:1348 , HOH F:2022	BINDING SITE FOR RESIDUE SO4 F1349

(no "SS Bond" information available for 2XE5)

(no "Cis Peptide Bond" information available for 2XE5)

(no "SAP(SNP)/Variant" information available for 2XE5)

(no "PROSITE Motif" information available for 2XE5)

(no "Exon" information available for 2XE5)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:343
 aligned with Q9K597_ECOLX | Q9K597 from UniProtKB/TrEMBL  Length:364

    Alignment length:343
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361   
         Q9K597_ECOLX    22 AEIYNKDGNKLDLYGKVDGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 364
               SCOP domains d2xe5a_ A: automated matches                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 2xe5A00 A:1-343 Porin                                                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeeeeeeeeeeeeee.hhhhhee..eeeeeeeeeee....eeeeeeeeeeee.........eeeeeeeeeeee...eeeeeeeee..hhhhhhhhh..................eeeeeeeeeeehhhhh...eeeeeeee.................hhhhh...eeeeeeeeee..eeeeeeeeeee.hhhhhh........eeeeeeeeeeeee..eeeeeeeeeee...ee...ee..eeeeeeeeeee.....eeeeeeeeeeeee........eeeeeeeeeeeeee....eeeeeeeeee....hhhhhhhh.....eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xe5 A   1 AEIYNKDGNKLDLYGKVEGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 343
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340

Chain B from PDB  Type:PROTEIN  Length:343
 aligned with Q9K597_ECOLX | Q9K597 from UniProtKB/TrEMBL  Length:364

    Alignment length:343
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361   
         Q9K597_ECOLX    22 AEIYNKDGNKLDLYGKVDGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 364
               SCOP domains d2xe5b_ B: automated matches                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 2xe5B00 B:1-343 Porin                                                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeeeeeeeeeeeee..hhhhhee..eeeeeeeeeee....eeeeeeeeeeee.........eeeeeeeeeeee...eeeeeeeee..hhhhhhhhh..................eeeeeeeeeeehhhhh...eeeeeeee.................hhhhh...eeeeeeeeee..eeeeeeeeeee.hhhhhh........eeeeeeeeeeeee..eeeeeeeeeee...ee...ee..eeeeeeeeeee.....eeeeeeeeeeeee........eeeeeeeeeeeeee....eeeeeeeeee....hhhhhhhh.....eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xe5 B   1 AEIYNKDGNKLDLYGKVEGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 343
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340

Chain C from PDB  Type:PROTEIN  Length:343
 aligned with Q9K597_ECOLX | Q9K597 from UniProtKB/TrEMBL  Length:364

    Alignment length:343
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361   
         Q9K597_ECOLX    22 AEIYNKDGNKLDLYGKVDGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 364
               SCOP domains d2xe5c_ C: automated matches                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 2xe5C00 C:1-343 Porin                                                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeeeeeeeeeeeee..hhhhhee..eeeeeeeeeee....eeeeeeeeeeee.........eeeeeeeeeeee...eeeeeeeee..hhhhhhhhh..................eeeeeeeeeeehhhhh...eeeeeeee.................hhhhh...eeeeeeeeee..eeeeeeeeeee.hhhhhh........eeeeeeeeeeeee..eeeeeeeeeee...ee...ee..eeeeeeeeeee.....eeeeeeeeeeeee........eeeeeeeeeeeeee....eeeeeeeeee....hhhhhhhh.....eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xe5 C   1 AEIYNKDGNKLDLYGKVEGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 343
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340

Chain D from PDB  Type:PROTEIN  Length:343
 aligned with Q9K597_ECOLX | Q9K597 from UniProtKB/TrEMBL  Length:364

    Alignment length:343
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361   
         Q9K597_ECOLX    22 AEIYNKDGNKLDLYGKVDGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 364
               SCOP domains d2xe5d_ D: automated matches                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 2xe5D00 D:1-343 Porin                                                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeeeeeeeeeeeee..hhhhhee..eeeeeeeeeee....eeeeeeeeeeee.........eeeeeeeeeeee...eeeeeeeee..hhhhhhhhh..................eeeeeeeeeeehhhhh...eeeeeeee.................hhhhh...eeeeeeeeee..eeeeeeeeeee.hhhhhh........eeeeeeeeeeeee..eeeeeeeeeee...ee...ee..eeeeeeeeeee.....eeeeeeeeeeeee........eeeeeeeeeeeeee....eeeeeeeeee....hhhhhhhh.....eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xe5 D   1 AEIYNKDGNKLDLYGKVEGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 343
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340

Chain E from PDB  Type:PROTEIN  Length:343
 aligned with Q9K597_ECOLX | Q9K597 from UniProtKB/TrEMBL  Length:364

    Alignment length:343
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361   
         Q9K597_ECOLX    22 AEIYNKDGNKLDLYGKVDGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 364
               SCOP domains d2xe5e_ E: automated matches                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 2xe5E00 E:1-343 Porin                                                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeeeeeeeeeeeee..hhhhhee..eeeeeeeeeee....eeeeeeeeeeee.........eeeeeeeeeeee...eeeeeeeee..hhhhhhhhh..................eeeeeeeeeeehhhhh...eeeeeeee.................hhhhh...eeeeeeeeee..eeeeeeeeeee.hhhhhh........eeeeeeeeeeeee..eeeeeeeeeee...ee...ee..eeeeeeeeeee.....eeeeeeeeeeeee........eeeeeeeeeeeeee....eeeeeeeeee....hhhhhhhh.....eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xe5 E   1 AEIYNKDGNKLDLYGKVEGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 343
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340

Chain F from PDB  Type:PROTEIN  Length:343
 aligned with Q9K597_ECOLX | Q9K597 from UniProtKB/TrEMBL  Length:364

    Alignment length:343
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361   
         Q9K597_ECOLX    22 AEIYNKDGNKLDLYGKVDGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 364
               SCOP domains d2xe5f_ F: automated matches                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 2xe5F00 F:1-343 Porin                                                                                                                                                                                                                                                                                                                                   CATH domains
           Pfam domains (1) -----Porin_1-2xe5F01 F:6-343                                                                                                                                                                                                                                                                                                                            Pfam domains (1)
           Pfam domains (2) -----Porin_1-2xe5F02 F:6-343                                                                                                                                                                                                                                                                                                                            Pfam domains (2)
           Pfam domains (3) -----Porin_1-2xe5F03 F:6-343                                                                                                                                                                                                                                                                                                                            Pfam domains (3)
           Pfam domains (4) -----Porin_1-2xe5F04 F:6-343                                                                                                                                                                                                                                                                                                                            Pfam domains (4)
           Pfam domains (5) -----Porin_1-2xe5F05 F:6-343                                                                                                                                                                                                                                                                                                                            Pfam domains (5)
           Pfam domains (6) -----Porin_1-2xe5F06 F:6-343                                                                                                                                                                                                                                                                                                                            Pfam domains (6)
         Sec.struct. author .eeeee..eeeeeeeeeeeeeeee.hhhhhee..eeeeeeeeeee....eeeeeeeeeeee.........eeeeeeeeeeee...eeeeeeeee..hhhhhhhhh..................eeeeeeeeeeehhhhh...eeeeeeee.................hhhhh...eeeeeeeeee..eeeeeeeeeee.hhhhhh........eeeeeeeeeeeee..eeeeeeeeeee...ee...ee..eeeeeeeeeee.....eeeeeeeeeeeee........eeeeeeeeeeeeee....eeeeeeeeee....hhhhhhhh.....eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xe5 F   1 AEIYNKDGNKLDLYGKVEGLHYFSDNDSKDGDKTYMRLGFKGETQVTDQLTGYGQWEYQIQGNEPESDNSSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYDSDNFMQQRGNGFATYRNTDFFGLVDGLDFAVQYQGKNGSAHGEGMTTNGRDDVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQNNTGLIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTRDAGINTDDIVALGLVYQF 343
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Membrane and cell surface proteins and peptides (2046)

Fold: Transmembrane beta-barrels (143)

Superfamily: Porins (99)

Family: Porin (49)

Protein domain: automated matches (9)

Escherichia coli [TaxId: 562] (6)

1a	d2xe5a_	A:
1b	d2xe5b_	B:
1c	d2xe5c_	C:
1d	d2xe5d_	D:
1e	d2xe5e_	E:
1f	d2xe5f_	F:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Beta Barrel (4804)

Topology: Porin (92)

Homologous Superfamily: Porin (47)

Escherichia coli. Organism_taxid: 562. Strain: o6. (5)

1a	2xe5A00	A:1-343
1b	2xe5B00	B:1-343
1c	2xe5C00	C:1-343
1d	2xe5D00	D:1-343
1e	2xe5E00	E:1-343
1f	2xe5F00	F:1-343

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: MBB (97)

Family: Porin_1 (16)

Escherichia coli (4)

1a	Porin_1-2xe5F01	F:6-343
1b	Porin_1-2xe5F02	F:6-343
1c	Porin_1-2xe5F03	F:6-343
1d	Porin_1-2xe5F04	F:6-343
1e	Porin_1-2xe5F05	F:6-343
1f	Porin_1-2xe5F06	F:6-343

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (Q9K597_ECOLX | Q9K597)

molecular function
	GO:0015288	porin activity	Catalysis of the transfer of substances, sized less than 1000 Da, from one side of the membrane to the other. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.
biological process
	GO:0006811	ion transport	The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0055085	transmembrane transport	The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
	GO:0009279	cell outer membrane	A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0046930	pore complex	Any small opening in a membrane that allows the passage of gases and/or liquids.

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	2xe5
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UniProtKB/TrEMBL
	Q9K597_ECOLX \| Q9K597	:	2xe2 2xe3 2xg6

2xe2	MOLECULAR INSIGHTS INTO CLINICALLY ISOLATED OMPC20 MUTANTS AND THEIR ROLE IN MULTI- DRUG RESISTANCE
2xe3	OMPC28

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (9, 47)

Sites (39, 39)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

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SCOP Domains (1, 6)

CATH Domains (1, 6)

Pfam Domains (1, 6)

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