Chain A from PDB Type:PROTEIN Length:146
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2x83A00 A:401-546 Human Immunodeficiency Virus Type 1 Capsid Protein CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee.....eee...hhhhhhhhhhhhhhh....hhhhhhhhhh...hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...............hhhhhh....hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2x83 A 401 PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS 546
410 420 430 440 450 460 470 480 490 500 510 520 530 540
Chain B from PDB Type:PROTEIN Length:163
aligned with B0ZE32_MACFA | B0ZE32 from UniProtKB/TrEMBL Length:467
Alignment length:163
313 323 333 343 353 363 373 383 393 403 413 423 433 443 453 463
B0ZE32_MACFA 304 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFRRIIPGFMCQGGDFTHHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMKRFGSRNGKTSKKITIADCGQL 466
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeee..eeeeeeeeee....hhhhhhhhhhhhhh............eee...eeee................................eeee...........eeee...hhhhh....eeeeeeehhhhhhhhhhhh.........eeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2x83 B 2 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTHHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMKRFGSRNGKTSKKITIADCGQL 164
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161
Chain C from PDB Type:PROTEIN Length:146
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2x83C00 C:401-546 Human Immunodeficiency Virus Type 1 Capsid Protein CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee.....eee...hhhhhhhhhhhhhhhh...hhhhhhhhhh...hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...............hhhhhh....hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2x83 C 401 PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYS 546
410 420 430 440 450 460 470 480 490 500 510 520 530 540
Chain D from PDB Type:PROTEIN Length:163
aligned with B0ZE32_MACFA | B0ZE32 from UniProtKB/TrEMBL Length:467
Alignment length:163
313 323 333 343 353 363 373 383 393 403 413 423 433 443 453 463
B0ZE32_MACFA 304 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFRRIIPGFMCQGGDFTHHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMKRFGSRNGKTSKKITIADCGQL 466
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -----Pro_isomerase-2x83D01 D:7-163 - Pfam domains (1)
Pfam domains (2) -----Pro_isomerase-2x83D02 D:7-163 - Pfam domains (2)
Sec.struct. author ...eeeeeeee..eeeeeeeeee....hhhhhhhhhhhhhh..........eeeee...eeee................................eeee...........eeee...hhhhh....eeeeeeehhhhhhhhhhhh.........eeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2x83 D 2 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTHHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMKRFGSRNGKTSKKITIADCGQL 164
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |