2X64 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   GLUTATHIONE-S-TRANSFERASE FROM XYLELLA FASTIDIOSA

Authors :   J. R. C. Muniz, N. C. Rodrigues, L. Bleicher, R. F. Travensolo, W. Garcia

Date :   14 Feb 10 (Deposition) - 02 Mar 10 (Release) - 07 Dec 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: C,D  (1x)
Biol. Unit 2: A,B  (1x)
Biol. Unit 3: E,F  (1x)

Keywords :   Detoxification Enzyme, Transferase, (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   N. C. Rodrigues, J. R. C. Muniz, L. Bleicher, W. Garcia, R. F. Travensolo, A. P. Ulian-De-Araujo, E. Carrilho, R. Garratt
Structural And Biophysical Characterization Of The Recombinant Glutathione-S-Transferase From Xylella
To Be Published
PubMed: search

Molecule 1 - GLUTATHIONE-S-TRANSFERASE
	Chains	:	A, B, C, D, E, F
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET-28A
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Organism Scientific	:	XYLELLA FASTIDIOSA
	Organism Taxid	:	160492
	Strain	:	9A5C

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:			C	D
Biological Unit 2 (1x)	:	A	B
Biological Unit 3 (1x)	:					E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 12)

No.	Name	Count	Type	Full Name
1	CL	6	Ligand/Ion	CHLORIDE ION
2	GSH	6	Ligand/Ion	GLUTATHIONE

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GSH	2	Ligand/Ion	GLUTATHIONE

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GSH	2	Ligand/Ion	GLUTATHIONE

Biological Unit 3 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GSH	2	Ligand/Ion	GLUTATHIONE

Asymmetric Unit (12, 12)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	CYS A:10 , MET A:35 , ALA A:48 , VAL A:49 , PRO A:50 , GLN A:61 , ASN A:62 , ASN A:99 , HIS A:103 , HOH A:2015 , HOH A:2045 , HOH A:2093 , SER B:100 , ASP B:101	BINDING SITE FOR RESIDUE GSH A1224
02	AC2	SOFTWARE	SER A:100 , ASP A:101 , CYS B:10 , MET B:35 , GLY B:47 , ALA B:48 , VAL B:49 , PRO B:50 , GLN B:61 , ASN B:62 , ASN B:99 , HIS B:103 , HOH B:2120 , HOH B:2121	BINDING SITE FOR RESIDUE GSH B1224
03	AC3	SOFTWARE	CYS C:10 , HIS C:32 , MET C:35 , ALA C:48 , VAL C:49 , PRO C:50 , GLN C:61 , ASN C:62 , ASN C:99 , HIS C:103 , SER D:100 , ASP D:101	BINDING SITE FOR RESIDUE GSH C1224
04	AC4	SOFTWARE	SER C:100 , ASP C:101 , CYS D:10 , HIS D:32 , MET D:35 , ALA D:48 , VAL D:49 , PRO D:50 , GLN D:61 , ASN D:62 , ASN D:99 , HIS D:103 , TYR D:161	BINDING SITE FOR RESIDUE GSH D1224
05	AC5	SOFTWARE	CYS E:10 , HIS E:32 , MET E:35 , ALA E:48 , VAL E:49 , PRO E:50 , GLN E:61 , ASN E:62 , ASN E:99 , HIS E:103 , HOH E:2028 , HOH E:2055 , HOH E:2109 , SER F:100 , ASP F:101	BINDING SITE FOR RESIDUE GSH E1224
06	AC6	SOFTWARE	SER E:100 , ASP E:101 , CYS F:10 , HIS F:32 , MET F:35 , ALA F:48 , VAL F:49 , PRO F:50 , THR F:60 , GLN F:61 , ASN F:62 , ASN F:99 , HIS F:103 , TYR F:161 , HOH F:2028 , HOH F:2134	BINDING SITE FOR RESIDUE GSH F1224
07	AC7	SOFTWARE	HOH B:2029	BINDING SITE FOR RESIDUE CL A1206
08	AC8	SOFTWARE	HOH D:2030	BINDING SITE FOR RESIDUE CL C1206
09	AC9	SOFTWARE	ARG E:93 , HOH F:2018	BINDING SITE FOR RESIDUE CL E1206
10	BC1	SOFTWARE	GLN A:61	BINDING SITE FOR RESIDUE CL B1206
11	BC2	SOFTWARE	HOH C:2036 , ARG D:93	BINDING SITE FOR RESIDUE CL D1206
12	BC3	SOFTWARE	THR E:60 , HOH E:2030 , ARG F:93	BINDING SITE FOR RESIDUE CL F1206

(no "SS Bond" information available for 2X64)

Asymmetric Unit

No.	Residues
1	Val A:49	-	Pro A:50
2	Val B:49	-	Pro B:50
3	Val C:49	-	Pro C:50
4	Val D:49	-	Pro D:50
5	Val E:49	-	Pro E:50
6	Val F:49	-	Pro F:50

(no "SAP(SNP)/Variant" information available for 2X64)

(no "PROSITE Motif" information available for 2X64)

(no "Exon" information available for 2X64)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:206
 aligned with Q9PE18_XYLFA | Q9PE18 from UniProtKB/TrEMBL  Length:205

    Alignment length:206
                             1                                                                                                                                                                                                            
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199      
         Q9PE18_XYLFA     - -MKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
               SCOP domains d2x64a1 A:0-77 automated matches                                              d2x64a2 A:78-205 automated matches                                                                                               SCOP domains
               CATH domains 2x64A01 A:0-79,A:193-205 Glutaredoxin                                           -----------------------------------------------------------------------------------------------------------------2x64A01       CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhhh..eeeee.......hhhhhh........eeee..eee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x64 A   0 HMKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199

Chain B from PDB  Type:PROTEIN  Length:207
 aligned with Q9PE18_XYLFA | Q9PE18 from UniProtKB/TrEMBL  Length:205

    Alignment length:207
                              1                                                                                                                                                                                                            
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       
         Q9PE18_XYLFA     - --MKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
               SCOP domains d2x64b1 B:-1-77 automated matches                                              d2x64b2 B:78-205 automated matches                                                                                               SCOP domains
               CATH domains 2x64B01 B:-1-79,B:193-205 Glutaredoxin                                           -----------------------------------------------------------------------------------------------------------------2x64B01       CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.....hhhhhhhhhhhh...eeee.......hhhhhh........eeee..eee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x64 B  -1 HHMKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198

Chain C from PDB  Type:PROTEIN  Length:207
 aligned with Q9PE18_XYLFA | Q9PE18 from UniProtKB/TrEMBL  Length:205

    Alignment length:207
                              1                                                                                                                                                                                                            
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       
         Q9PE18_XYLFA     - --MKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
               SCOP domains d2x64c1 C:-1-77 automated matches                                              d2x64c2 C:78-205 automated matches                                                                                               SCOP domains
               CATH domains 2x64C01 C:-1-79,C:193-205 Glutaredoxin                                           -----------------------------------------------------------------------------------------------------------------2x64C01       CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....hhhhhhhhhhhhh...eeee.......hhhhhhhh......eeee..eee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x64 C  -1 HHMKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198

Chain D from PDB  Type:PROTEIN  Length:206
 aligned with Q9PE18_XYLFA | Q9PE18 from UniProtKB/TrEMBL  Length:205

    Alignment length:206
                             1                                                                                                                                                                                                            
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199      
         Q9PE18_XYLFA     - -MKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
               SCOP domains d2x64d1 D:0-77 automated matches                                              d2x64d2 D:78-205 automated matches                                                                                               SCOP domains
               CATH domains 2x64D01 D:0-79,D:193-205 Glutaredoxin                                           -----------------------------------------------------------------------------------------------------------------2x64D01       CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhhh..eeeee.......hhhhhh........eeee..eee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x64 D   0 HMKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199

Chain E from PDB  Type:PROTEIN  Length:205
 aligned with Q9PE18_XYLFA | Q9PE18 from UniProtKB/TrEMBL  Length:205

    Alignment length:205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200     
         Q9PE18_XYLFA     1 MKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
               SCOP domains d2x64e1 E:1-77 automated matches                                             d2x64e2 E:78-205 automated matches                                                                                               SCOP domains
               CATH domains 2x64E01 E:1-79,E:193-205 Glutaredoxin                                          -----------------------------------------------------------------------------------------------------------------2x64E01       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.....hhhhhhhhhhhh...eeee.......hhhhhh........eeee..eee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x64 E   1 MKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200

Chain F from PDB  Type:PROTEIN  Length:206
 aligned with Q9PE18_XYLFA | Q9PE18 from UniProtKB/TrEMBL  Length:205

    Alignment length:206
                             1                                                                                                                                                                                                            
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199      
         Q9PE18_XYLFA     - -MKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
               SCOP domains d2x64f1 F:0-77 automated matches                                              d2x64f2 F:78-205 automated matches                                                                                               SCOP domains
               CATH domains 2x64F01 F:0-79,F:193-205 Glutaredoxin                                           -----------------------------------------------------------------------------------------------------------------2x64F01       CATH domains
           Pfam domains (1) -GST_N-2x64F07 F:1-71                                                   ------------------------------GST_C-2x64F01 F:102-193                                                                     ------------ Pfam domains (1)
           Pfam domains (2) -GST_N-2x64F08 F:1-71                                                   ------------------------------GST_C-2x64F02 F:102-193                                                                     ------------ Pfam domains (2)
           Pfam domains (3) -GST_N-2x64F09 F:1-71                                                   ------------------------------GST_C-2x64F03 F:102-193                                                                     ------------ Pfam domains (3)
           Pfam domains (4) -GST_N-2x64F10 F:1-71                                                   ------------------------------GST_C-2x64F04 F:102-193                                                                     ------------ Pfam domains (4)
           Pfam domains (5) -GST_N-2x64F11 F:1-71                                                   ------------------------------GST_C-2x64F05 F:102-193                                                                     ------------ Pfam domains (5)
           Pfam domains (6) -GST_N-2x64F12 F:1-71                                                   ------------------------------GST_C-2x64F06 F:102-193                                                                     ------------ Pfam domains (6)
         Sec.struct. author .eeeee.....hhhhhhhhhhhh..eeeee.......hhhhhh........eeee..eee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x64 F   0 HMKLYIMPGACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI 205
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: GST C-terminal domain-like (353)

Superfamily: GST C-terminal domain-like (353)

Family: automated matches (86)

Protein domain: automated matches (86)

Xylella fastidiosa [TaxId: 160492] (1)

1a	d2x64a2	A:78-205
1b	d2x64b2	B:78-205
1c	d2x64c2	C:78-205
1d	d2x64d2	D:78-205
1e	d2x64e2	E:78-205
1f	d2x64f2	F:78-205

Class: Alpha and beta proteins (a/b) (23833)

Fold: Thioredoxin fold (994)

Superfamily: Thioredoxin-like (992)

Family: automated matches (347)

Protein domain: automated matches (347)

Xylella fastidiosa [TaxId: 160492] (1)

2a	d2x64a1	A:0-77
2b	d2x64b1	B:-1-77
2c	d2x64c1	C:-1-77
2d	d2x64d1	D:0-77
2e	d2x64e1	E:1-77
2f	d2x64f1	F:0-77

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Glutaredoxin (620)

Homologous Superfamily: Glutaredoxin (617)

Xylella fastidiosa. Organism_taxid: 160492. Strain: 9a5c. (1)

1a	2x64B01	B:-1-79,B:193-205
1b	2x64C01	C:-1-79,C:193-205
1c	2x64A01	A:0-79,A:193-205
1d	2x64D01	D:0-79,D:193-205
1e	2x64F01	F:0-79,F:193-205
1f	2x64E01	E:1-79,E:193-205

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: GST_C (118)

Family: GST_C (102)

Xylella fastidiosa (1)

1a	GST_C-2x64F01	F:102-193
1b	GST_C-2x64F02	F:102-193
1c	GST_C-2x64F03	F:102-193
1d	GST_C-2x64F04	F:102-193
1e	GST_C-2x64F05	F:102-193
1f	GST_C-2x64F06	F:102-193

Clan: Thioredoxin (367)

Family: GST_N (88)

Xylella fastidiosa (1)

2a	GST_N-2x64F07	F:1-71
2b	GST_N-2x64F08	F:1-71
2c	GST_N-2x64F09	F:1-71
2d	GST_N-2x64F10	F:1-71
2e	GST_N-2x64F11	F:1-71
2f	GST_N-2x64F12	F:1-71

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (Q9PE18_XYLFA | Q9PE18)

molecular function
	GO:0016740		transferase activity		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

Asymmetric Unit
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Val A:49 - Pro A:50	[ RasMol ]
		Val B:49 - Pro B:50	[ RasMol ]
		Val C:49 - Pro C:50	[ RasMol ]
		Val D:49 - Pro D:50	[ RasMol ]
		Val E:49 - Pro E:50	[ RasMol ]
		Val F:49 - Pro F:50	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
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Jmol
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Access by PDB/NDB ID
	2x64
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
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	Q9PE18_XYLFA \| Q9PE18
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	Q9PE18_XYLFA \| Q9PE18
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(no "Entries Sharing at Least One Protein Chain" available for 2X64)

(no "Related Entries Specified in the PDB File" available for 2X64)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 12)

Sites (12, 12)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 12)

CATH Domains (1, 6)

Pfam Domains (2, 12)

Gene Ontology (1, 1)

Visualization

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Still Images

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File