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(-) Description

Title :  SULFOLACTATE DEHYDROGENASE FROM METHANOCALDOCOCCUS JANNASCHII
 
Authors :  A. Irimia, D. Madern, G. Zaccai, F. M. D. Vellieux
Date :  07 Dec 09  (Deposition) - 15 Dec 09  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  G,H  (1x)
Biol. Unit 2:  E,F  (1x)
Biol. Unit 3:  C,D  (1x)
Biol. Unit 4:  A,B  (1x)
Keywords :  Oxidoreductase, Hyperthermostable, Coenzyme M, Methanogens, Coenzyme M Biosynthesis, Pro-S Hydrogen Transfer, Nad-Binding Without A Rossmann Fold (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Irimia, D. Madern, F. M. D. Vellieux
Methanoarchaeal Sulfolactate Dehydrogenase: Prototype Of A New Family Of Nadh-Dependent Enzymes.
Embo J. V. 23 1234 2004
PubMed-ID: 15014443  |  Reference-DOI: 10.1038/SJ.EMBOJ.7600147
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - L-SULFOLACTATE DEHYDROGENASE
    Chains: A, B, C, D, E, F, G, H
    EC Number: 1.1.1.272
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PT 77
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: METHANOCALDOCOCCUS JANNASCHII
    Organism Taxid: 2190
    Synonym: (R)-SULFOLACTATE DEHYDROGENASE, (R)-2-HYDROXYACID DEHYDROGENASE

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x):       GH
Biological Unit 2 (1x):     EF  
Biological Unit 3 (1x):   CD    
Biological Unit 4 (1x): AB      

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 80)

Asymmetric Unit (2, 80)
No.NameCountTypeFull Name
1MSE72Mod. Amino AcidSELENOMETHIONINE
2NAD8Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 1 (2, 20)
No.NameCountTypeFull Name
1MSE18Mod. Amino AcidSELENOMETHIONINE
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 2 (2, 20)
No.NameCountTypeFull Name
1MSE18Mod. Amino AcidSELENOMETHIONINE
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 3 (2, 20)
No.NameCountTypeFull Name
1MSE18Mod. Amino AcidSELENOMETHIONINE
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 4 (2, 20)
No.NameCountTypeFull Name
1MSE18Mod. Amino AcidSELENOMETHIONINE
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:41 , HIS A:44 , HIS A:116 , PHE A:117 , GLY A:118 , ILE A:119 , ALA A:120 , THR A:140 , THR A:156 , PRO A:158 , SER A:171 , ASP A:173 , MSE A:174 , ALA A:175 , LEU A:301 , PRO A:303 , GLY A:304 , ILE A:306 , GLU A:307 , HOH A:2065 , HOH A:2079 , PRO B:224 , LYS B:225 , TYR B:227BINDING SITE FOR RESIDUE NAD A 4001
2AC2SOFTWAREPRO A:224 , LYS A:225 , PHE B:41 , HIS B:44 , HIS B:116 , GLY B:118 , ILE B:119 , ALA B:120 , THR B:140 , THR B:156 , PRO B:158 , SER B:171 , ASP B:173 , ALA B:175 , LEU B:301 , GLY B:304 , ILE B:306 , GLU B:307 , HOH B:2063BINDING SITE FOR RESIDUE NAD B 4002
3AC3SOFTWAREPHE C:41 , HIS C:44 , HIS C:116 , PHE C:117 , GLY C:118 , ILE C:119 , ALA C:120 , THR C:140 , THR C:156 , SER C:171 , ASP C:173 , ALA C:175 , LEU C:301 , GLY C:304 , ILE C:306 , GLU C:307 , HOH C:2053 , PHE D:147 , LYS D:225 , TYR D:227BINDING SITE FOR RESIDUE NAD C 4003
4AC4SOFTWAREPHE C:147 , PRO C:224 , LYS C:225 , TYR C:227 , PHE D:41 , HIS D:44 , HIS D:116 , PHE D:117 , GLY D:118 , ALA D:120 , THR D:140 , THR D:156 , SER D:171 , ASP D:173 , ALA D:175 , LEU D:301 , GLY D:304 , ILE D:306 , GLU D:307 , HOH D:2054 , HOH D:2055BINDING SITE FOR RESIDUE NAD D 4004
5AC5SOFTWAREPHE E:41 , HIS E:44 , HIS E:116 , PHE E:117 , GLY E:118 , ALA E:120 , THR E:140 , THR E:156 , SER E:171 , ASP E:173 , ALA E:175 , LEU E:301 , GLY E:304 , ILE E:306 , GLU E:307 , HOH E:2064 , HOH E:2065 , PRO F:224 , LYS F:225 , TYR F:227BINDING SITE FOR RESIDUE NAD E 4005
6AC6SOFTWAREPRO E:224 , LYS E:225 , TYR E:227 , PHE F:41 , HIS F:44 , HIS F:116 , PHE F:117 , GLY F:118 , ILE F:119 , ALA F:120 , THR F:140 , THR F:156 , ASP F:173 , ALA F:175 , LEU F:301 , PRO F:303 , GLY F:304 , ILE F:306 , GLU F:307BINDING SITE FOR RESIDUE NAD F 4006
7AC7SOFTWAREPHE G:41 , HIS G:44 , HIS G:116 , PHE G:117 , GLY G:118 , ALA G:120 , THR G:140 , THR G:156 , PRO G:158 , ASP G:173 , MSE G:174 , ALA G:175 , LEU G:301 , GLY G:304 , ILE G:306 , GLU G:307 , HOH G:2064 , HOH G:2069 , LYS H:225 , TYR H:227BINDING SITE FOR RESIDUE NAD G 4007
8AC8SOFTWAREPHE G:147 , PRO G:224 , LYS G:225 , TYR G:227 , HOH G:2040 , PHE H:41 , HIS H:44 , HIS H:116 , PHE H:117 , GLY H:118 , ILE H:119 , ALA H:120 , THR H:140 , THR H:156 , SER H:171 , ASP H:173 , ALA H:175 , LEU H:301 , GLY H:304 , ILE H:306 , GLU H:307 , HOH H:2052BINDING SITE FOR RESIDUE NAD H 4008

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2X06)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Ile E:343 -Glu E:344

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2X06)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2X06)

(-) Exons   (0, 0)

(no "Exon" information available for 2X06)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:344
 aligned with COMC_METJA | Q58820 from UniProtKB/Swiss-Prot  Length:344

    Alignment length:344
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340    
           COMC_METJA     1 MILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVGVGVVATRNANHFGIAGYYSELAMNQDMIGITITNTEPAMAPFGGKEKILGTNPIAIAFKGNKYKFSLDMATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEMLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFMGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKMKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
               SCOP domains d2x06a_ A: L-sulfolactate dehydrogenase                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeee...eeeee....hhhhhhhhhhhhhhhhhhhhheeeeeee.......hhhhhhhhhh...eeeeee...................eeeeeee....eeeeeee.....hhhhhhhhhh........ee........hhhhhhhhee...hhhhhhhhhhhhhhhh......hhhhh............eeeeeee.hhhh.hhhhhhhhhhhhhhhhhh............hhhhhhhhhhh...ee.hhhhhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x06 A   1 mILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAmELAIKKAKNVGVGVVATRNANHFGIAGYYSELAmNQDmIGITITNTEPAmAPFGGKEKILGTNPIAIAFKGNKYKFSLDmATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEmLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFmGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKmKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
                            |       10        20        30        40        50        60        70        80        90   |   100       110       120       130 |     140   |   150       160       170   |   180       190       200       210       220       230    |  240       250       260       270  |    280       290       300       310 |     320       330       340    
                            |                                                                                           94-MSE                           128-MSE         144-MSE                       174-MSE                                                      235-MSE                               273-MSE                                312-MSE                            
                            1-MSE                                                                                                                            132-MSE                                                                                                                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:344
 aligned with COMC_METJA | Q58820 from UniProtKB/Swiss-Prot  Length:344

    Alignment length:344
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340    
           COMC_METJA     1 MILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVGVGVVATRNANHFGIAGYYSELAMNQDMIGITITNTEPAMAPFGGKEKILGTNPIAIAFKGNKYKFSLDMATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEMLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFMGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKMKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
               SCOP domains d2x06b_ B: L-sulfolactate dehydrogenase                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeee...eeeee....hhhhhhhhhhhhhhhhhhhhheeeeeee......hhhhhhhhhhhh..eeeeee....................eeeeee....eeeeee.....hhhhhhhhhhh........ee.....ee.hhhhhhh.ee...hhhhhhhhhhhhhhhh......hhhhh.............eeeeee.hhhh.hhhhhhhhhhhhhhhhhh............hhhhhhhhhhhh..ee.hhhhhhhhhhhhhhhh.hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x06 B   1 mILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAmELAIKKAKNVGVGVVATRNANHFGIAGYYSELAmNQDmIGITITNTEPAmAPFGGKEKILGTNPIAIAFKGNKYKFSLDmATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEmLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFmGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKmKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
                            |       10        20        30        40        50        60        70        80        90   |   100       110       120       130 |     140   |   150       160       170   |   180       190       200       210       220       230    |  240       250       260       270  |    280       290       300       310 |     320       330       340    
                            1-MSE                                                                                       94-MSE                           128-MSE         144-MSE                       174-MSE                                                      235-MSE                               273-MSE                                312-MSE                            
                                                                                                                                                             132-MSE                                                                                                                                                                                                                


Chain C from PDB  Type:PROTEIN  Length:344
 aligned with COMC_METJA | Q58820 from UniProtKB/Swiss-Prot  Length:344

    Alignment length:344
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340    
           COMC_METJA     1 MILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVGVGVVATRNANHFGIAGYYSELAMNQDMIGITITNTEPAMAPFGGKEKILGTNPIAIAFKGNKYKFSLDMATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEMLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFMGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKMKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
               SCOP domains d2x06c_ C: L-sulfolactate dehydrogenase                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeee...eeeee....hhhhhhhhhhhhhhhhhhhhheeeeeee.......hhhhhhhhhh...eeeeee...................eeeeeee....eeeeeee....hhhhhhhhhh.........ee........hhhhhhh.ee...hhhhhhhhhhhhhhhh......hhhhh.............eeeeee.hhhh.hhhhhhhhhhhhhhhhhh............hhhhhhhhhhh...ee.hhhhhhhhhhhhhh...hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x06 C   1 mILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAmELAIKKAKNVGVGVVATRNANHFGIAGYYSELAmNQDmIGITITNTEPAmAPFGGKEKILGTNPIAIAFKGNKYKFSLDmATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEmLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFmGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKmKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
                            |       10        20        30        40        50        60        70        80        90   |   100       110       120       130 |     140   |   150       160       170   |   180       190       200       210       220       230    |  240       250       260       270  |    280       290       300       310 |     320       330       340    
                            1-MSE                                                                                       94-MSE                           128-MSE         144-MSE                       174-MSE                                                      235-MSE                               273-MSE                                312-MSE                            
                                                                                                                                                             132-MSE                                                                                                                                                                                                                


Chain D from PDB  Type:PROTEIN  Length:344
 aligned with COMC_METJA | Q58820 from UniProtKB/Swiss-Prot  Length:344

    Alignment length:344
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340    
           COMC_METJA     1 MILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVGVGVVATRNANHFGIAGYYSELAMNQDMIGITITNTEPAMAPFGGKEKILGTNPIAIAFKGNKYKFSLDMATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEMLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFMGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKMKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
               SCOP domains d2x06d_ D: L-sulfolactate dehydrogenase                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeee...eeeee....hhhhhhhhhhhhhhhhhhhhheeeeeee.......hhhhhhhhhh...eeeeee....................eeeeee....eeeeee.....hhhhhhhhhhh........ee.....ee.hhhhhhh......hhhhhhhhhhhhhhhh......hhhhh............eeeeeee.hhhh.hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh..ee.hhhhhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x06 D   1 mILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAmELAIKKAKNVGVGVVATRNANHFGIAGYYSELAmNQDmIGITITNTEPAmAPFGGKEKILGTNPIAIAFKGNKYKFSLDmATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEmLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFmGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKmKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
                            |       10        20        30        40        50        60        70        80        90   |   100       110       120       130 |     140   |   150       160       170   |   180       190       200       210       220       230    |  240       250       260       270  |    280       290       300       310 |     320       330       340    
                            1-MSE                                                                                       94-MSE                           128-MSE         144-MSE                       174-MSE                                                      235-MSE                               273-MSE                                312-MSE                            
                                                                                                                                                             132-MSE                                                                                                                                                                                                                


Chain E from PDB  Type:PROTEIN  Length:344
 aligned with COMC_METJA | Q58820 from UniProtKB/Swiss-Prot  Length:344

    Alignment length:344
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340    
           COMC_METJA     1 MILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVGVGVVATRNANHFGIAGYYSELAMNQDMIGITITNTEPAMAPFGGKEKILGTNPIAIAFKGNKYKFSLDMATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEMLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFMGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKMKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
               SCOP domains d2x06e_ E: L-sulfolactate dehydrogenase                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeee...eeeeeeeeehhhhhhhhhhhhhhhhhhhhheeeeeeeee....hhhhhhhhhhh...eeeeee...................eeeeeee....eeeeeee....hhhhhhhhhhhh.......ee.....ee.hhhhhhhhee...hhhhhhhhhhhhhhhh......hhhhh............eeeeeee.hhhh.hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh...ee.hhhhhhhhhhhhh....hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x06 E   1 mILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAmELAIKKAKNVGVGVVATRNANHFGIAGYYSELAmNQDmIGITITNTEPAmAPFGGKEKILGTNPIAIAFKGNKYKFSLDmATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEmLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFmGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKmKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
                            |       10        20        30        40        50        60        70        80        90   |   100       110       120       130 |     140   |   150       160       170   |   180       190       200       210       220       230    |  240       250       260       270  |    280       290       300       310 |     320       330       340    
                            1-MSE                                                                                       94-MSE                           128-MSE         144-MSE                       174-MSE                                                      235-MSE                               273-MSE                                312-MSE                            
                                                                                                                                                             132-MSE                                                                                                                                                                                                                


Chain F from PDB  Type:PROTEIN  Length:344
 aligned with COMC_METJA | Q58820 from UniProtKB/Swiss-Prot  Length:344

    Alignment length:344
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340    
           COMC_METJA     1 MILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVGVGVVATRNANHFGIAGYYSELAMNQDMIGITITNTEPAMAPFGGKEKILGTNPIAIAFKGNKYKFSLDMATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEMLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFMGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKMKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
               SCOP domains d2x06f_ F: L-sulfolactate dehydrogenase                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh.........eeeee...eeeee....hhhhhhhhhhhhhhhhhhhhheeeeeee......hhhhhhhhhhh...eeeeee...................eeeeeee....eeeeeee.......hhhhhhh.........ee.....ee.hhhhhhh.ee...hhhhhhhhhhhhhhhh......hhhhh............eeeeeee.hhhh.hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh..ee.hhhhhhhhhhhhhh...hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x06 F   1 mILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAmELAIKKAKNVGVGVVATRNANHFGIAGYYSELAmNQDmIGITITNTEPAmAPFGGKEKILGTNPIAIAFKGNKYKFSLDmATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEmLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFmGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKmKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
                            |       10        20        30        40        50        60        70        80        90   |   100       110       120       130 |     140   |   150       160       170   |   180       190       200       210       220       230    |  240       250       260       270  |    280       290       300       310 |     320       330       340    
                            1-MSE                                                                                       94-MSE                           128-MSE         144-MSE                       174-MSE                                                      235-MSE                               273-MSE                                312-MSE                            
                                                                                                                                                             132-MSE                                                                                                                                                                                                                


Chain G from PDB  Type:PROTEIN  Length:344
 aligned with COMC_METJA | Q58820 from UniProtKB/Swiss-Prot  Length:344

    Alignment length:344
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340    
           COMC_METJA     1 MILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVGVGVVATRNANHFGIAGYYSELAMNQDMIGITITNTEPAMAPFGGKEKILGTNPIAIAFKGNKYKFSLDMATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEMLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFMGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKMKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
               SCOP domains d2x06g_ G: L-sulfolactate dehydrogenase                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeee...eeeeeeeeehhhhhhhhhhhhhhhhhhhhheeeeeeeee....hhhhhhhhhhh...eeeeee...................eeeeeee....eeeeeee....hhhhhhhhhh.........ee........hhhhhhhhee...hhhhhhhhhhhhhhhh......hhhhh.............eeeeee.hhhh.hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh...ee.hhhhhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x06 G   1 mILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAmELAIKKAKNVGVGVVATRNANHFGIAGYYSELAmNQDmIGITITNTEPAmAPFGGKEKILGTNPIAIAFKGNKYKFSLDmATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEmLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFmGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKmKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
                            |       10        20        30        40        50        60        70        80        90   |   100       110       120       130 |     140   |   150       160       170   |   180       190       200       210       220       230    |  240       250       260       270  |    280       290       300       310 |     320       330       340    
                            1-MSE                                                                                       94-MSE                           128-MSE         144-MSE                       174-MSE                                                      235-MSE                               273-MSE                                312-MSE                            
                                                                                                                                                             132-MSE                                                                                                                                                                                                                


Chain H from PDB  Type:PROTEIN  Length:344
 aligned with COMC_METJA | Q58820 from UniProtKB/Swiss-Prot  Length:344

    Alignment length:344
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340    
           COMC_METJA     1 MILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAMELAIKKAKNVGVGVVATRNANHFGIAGYYSELAMNQDMIGITITNTEPAMAPFGGKEKILGTNPIAIAFKGNKYKFSLDMATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEMLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFMGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKMKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
               SCOP domains d2x06h_ H: L-sulfolactate dehydrogenase                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) Ldh_2-2x06H01 H:1-331                                                                                                                                                                                                                                                                                                                      ------------- Pfam domains (1)
           Pfam domains (2) Ldh_2-2x06H02 H:1-331                                                                                                                                                                                                                                                                                                                      ------------- Pfam domains (2)
           Pfam domains (3) Ldh_2-2x06H03 H:1-331                                                                                                                                                                                                                                                                                                                      ------------- Pfam domains (3)
           Pfam domains (4) Ldh_2-2x06H04 H:1-331                                                                                                                                                                                                                                                                                                                      ------------- Pfam domains (4)
           Pfam domains (5) Ldh_2-2x06H05 H:1-331                                                                                                                                                                                                                                                                                                                      ------------- Pfam domains (5)
           Pfam domains (6) Ldh_2-2x06H06 H:1-331                                                                                                                                                                                                                                                                                                                      ------------- Pfam domains (6)
           Pfam domains (7) Ldh_2-2x06H07 H:1-331                                                                                                                                                                                                                                                                                                                      ------------- Pfam domains (7)
           Pfam domains (8) Ldh_2-2x06H08 H:1-331                                                                                                                                                                                                                                                                                                                      ------------- Pfam domains (8)
         Sec.struct. author .eehhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeee...eeeeeeeeehhhhhhhhhhhhhhhhhhhhheeeeeeeee.....hhhhhhhhhh...eeeeee...................eeeeeee....eeeeeee....hhhhhhhhhhh........ee.....ee.hhhhhhhhee...hhhhhhhhhhhhhhhh......hhhhh.............eeeeee.hhhh.hhhhhhhhhhhhhhhhhh............hhhhhhhhhhhh..ee.hhhhhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x06 H   1 mILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAmELAIKKAKNVGVGVVATRNANHFGIAGYYSELAmNQDmIGITITNTEPAmAPFGGKEKILGTNPIAIAFKGNKYKFSLDmATASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIEmLSAIGGAEVGTKVKGTANPEERCTKGDLFIAINPEFFmGKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKmKRKDGFEIDKNLYNQLKEICNELGLNIEDYIE 344
                            |       10        20        30        40        50        60        70        80        90   |   100       110       120       130 |     140   |   150       160       170   |   180       190       200       210       220       230    |  240       250       260       270  |    280       290       300       310 |     320       330       340    
                            1-MSE                                                                                       94-MSE                           128-MSE         144-MSE                       174-MSE                                                      235-MSE                               273-MSE                                312-MSE                            
                                                                                                                                                             132-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2X06)

(-) Pfam Domains  (1, 8)

Asymmetric Unit
(-)
Clan: no clan defined [family: Ldh_2] (7)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (COMC_METJA | Q58820)
molecular function
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0050545    sulfopyruvate decarboxylase activity    Catalysis of the reaction: 3-sulfopyruvate + H(+) = CO(2) + sulfoacetaldehyde.
biological process
    GO:0019295    coenzyme M biosynthetic process    The chemical reactions and pathways resulting in the formation of coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

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