2WOI - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   TRYPANOTHIONE REDUCTASE FROM TRYPANOSOMA BRUCEI

Authors :   M. S. Alphey, A. H. Fairlamb

Date :   24 Jul 09 (Deposition) - 04 Aug 10 (Release) - 19 Oct 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Trypanosomiasis, Sleeping Sickness, Flavoprotein, Trypanothione, Oxidoreductase, Fad, Nadp, Reductase, Redox-Active Center (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Patterson, M. S. Alphey, D. C. Jones, E. J. Shanks, I. P. Street, J. A. Frearson, P. G. Wyatt, I. H. Gilbert, A. H. Fairlamb
Dihydroquinazolines As A Novel Class Of Trypanosoma Brucei Trypanothione Reductase Inhibitors: Discovery, Synthesis, And Characterization Of Their Binding Mode By Protein Crystallography.
J. Med. Chem. V. 54 6514 2011
PubMed-ID: 21851087 | Reference-DOI: 10.1021/JM200312V

Molecule 1 - TRYPANOTHIONE REDUCTASE
	Chains	:	A, B, C, D
	EC Number	:	1.8.1.12
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET15B
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Variant	:	CODONPLUS RIL
	Organism Scientific	:	TRYPANOSOMA BRUCEI
	Organism Taxid	:	5691

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 15)

No.	Name	Count	Type	Full Name
1	CL	6	Ligand/Ion	CHLORIDE ION
2	FAD	4	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
3	NA	5	Ligand/Ion	SODIUM ION

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	FAD	2	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
3	NA	-1	Ligand/Ion	SODIUM ION

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	FAD	2	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
3	NA	-1	Ligand/Ion	SODIUM ION

Asymmetric Unit (15, 15)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ILE A:10 , GLY A:11 , GLY A:13 , SER A:14 , GLY A:15 , VAL A:34 , ASP A:35 , ALA A:46 , ALA A:47 , GLY A:50 , THR A:51 , CYS A:52 , GLY A:56 , CYS A:57 , LYS A:60 , GLY A:125 , TRP A:126 , GLY A:127 , ALA A:159 , THR A:160 , GLY A:161 , PHE A:198 , ARG A:287 , ARG A:290 , GLY A:326 , ASP A:327 , MET A:333 , LEU A:334 , THR A:335 , PRO A:336 , HOH A:2037 , HOH A:2185 , HOH A:2287 , HOH A:2289 , HOH A:2386 , HOH A:2387 , HOH A:2388 , HOH A:2389 , HIS B:461	BINDING SITE FOR RESIDUE FAD A 998
02	AC2	SOFTWARE	HIS A:461 , HOH A:2369 , ILE B:10 , GLY B:11 , GLY B:13 , SER B:14 , GLY B:15 , VAL B:34 , ASP B:35 , VAL B:36 , ALA B:46 , ALA B:47 , GLY B:50 , THR B:51 , CYS B:52 , VAL B:55 , CYS B:57 , LYS B:60 , GLY B:125 , GLY B:127 , ALA B:159 , THR B:160 , GLY B:161 , PHE B:198 , ILE B:199 , ARG B:287 , ARG B:290 , GLY B:326 , ASP B:327 , MET B:333 , LEU B:334 , THR B:335 , PRO B:336 , HOH B:2015 , HOH B:2181 , HOH B:2196 , HOH B:2224 , HOH B:2278 , HOH B:2280 , HOH B:2281	BINDING SITE FOR RESIDUE FAD B 998
03	AC3	SOFTWARE	ILE C:10 , GLY C:11 , GLY C:13 , SER C:14 , GLY C:15 , VAL C:34 , ASP C:35 , ALA C:46 , ALA C:47 , GLY C:50 , THR C:51 , CYS C:52 , GLY C:56 , CYS C:57 , LYS C:60 , GLY C:125 , GLY C:127 , ALA C:159 , THR C:160 , GLY C:161 , ARG C:287 , ARG C:290 , GLY C:326 , ASP C:327 , MET C:333 , LEU C:334 , THR C:335 , PRO C:336 , HOH C:2163 , HOH C:2179 , HOH C:2182 , HOH C:2264 , HOH C:2265 , HOH C:2266 , HIS D:461	BINDING SITE FOR RESIDUE FAD C 998
04	AC4	SOFTWARE	HIS C:461 , HOH C:2244 , ILE D:10 , GLY D:11 , GLY D:13 , SER D:14 , GLY D:15 , VAL D:34 , ASP D:35 , VAL D:36 , ALA D:47 , GLY D:50 , THR D:51 , CYS D:52 , GLY D:56 , CYS D:57 , LYS D:60 , GLY D:125 , TRP D:126 , GLY D:127 , ALA D:159 , THR D:160 , GLY D:161 , PHE D:198 , ARG D:287 , ARG D:290 , GLY D:326 , ASP D:327 , MET D:333 , LEU D:334 , THR D:335 , PRO D:336 , ALA D:338 , HOH D:2210 , HOH D:2310 , HOH D:2311 , HOH D:2312 , HOH D:2313	BINDING SITE FOR RESIDUE FAD D 998
05	AC5	SOFTWARE	ARG C:222 , HOH C:2137	BINDING SITE FOR RESIDUE CL C1487
06	AC6	SOFTWARE	TYR B:221 , ARG B:222 , HOH B:2152	BINDING SITE FOR RESIDUE CL B1489
07	AC7	SOFTWARE	ARG A:222 , HOH A:2224	BINDING SITE FOR RESIDUE CL A1489
08	AC8	SOFTWARE	TYR D:221 , ARG D:222 , HOH D:2192	BINDING SITE FOR RESIDUE CL D1487
09	AC9	SOFTWARE	TRP A:92 , HOH A:2065 , HOH A:2077	BINDING SITE FOR RESIDUE CL A1490
10	BC1	SOFTWARE	ARG B:235 , HOH B:2123	BINDING SITE FOR RESIDUE CL B1490
11	BC2	SOFTWARE	TYR A:455 , THR A:457 , CYS A:469 , HOH A:2364 , HOH A:2368	BINDING SITE FOR RESIDUE NA A1491
12	BC3	SOFTWARE	TYR D:455 , THR D:457 , CYS D:469 , HOH D:2298	BINDING SITE FOR RESIDUE NA D1488
13	BC4	SOFTWARE	PHE D:114 , THR D:117 , LEU D:120 , HOH D:2091 , HOH D:2098 , HOH D:2100	BINDING SITE FOR RESIDUE NA D1489
14	BC5	SOFTWARE	PHE C:114 , THR C:117 , LEU C:120 , HOH C:2062	BINDING SITE FOR RESIDUE NA C1488
15	BC6	SOFTWARE	PHE B:114 , THR B:117 , LEU B:120 , HOH B:2077	BINDING SITE FOR RESIDUE NA B1491

Asymmetric Unit

No.	Residues
1	A:52	-	A:57
2	B:52	-	B:57
3	C:52	-	C:57
4	D:52	-	D:57

Asymmetric Unit

No.	Residues
1	Pro A:42	-	Pro A:43
2	Ile A:369	-	Pro A:370
3	His A:461	-	Pro A:462
4	Pro B:42	-	Pro B:43
5	Ile B:369	-	Pro B:370
6	His B:461	-	Pro B:462
7	Pro C:42	-	Pro C:43
8	Ile C:369	-	Pro C:370
9	His C:461	-	Pro C:462
10	Pro D:42	-	Pro D:43
11	Ile D:369	-	Pro D:370
12	His D:461	-	Pro D:462

(no "SAP(SNP)/Variant" information available for 2WOI)

(no "PROSITE Motif" information available for 2WOI)

(no "Exon" information available for 2WOI)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:490
 aligned with Q389T8_TRYB2 | Q389T8 from UniProtKB/TrEMBL  Length:492

    Alignment length:490
                              1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488
         Q389T8_TRYB2     - --MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEKMEKLP 488
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2woiA01 A:-1-164,A:286-360  [code=3.50.50.60, no name defined]                                                                                                        2woiA02 A:165-285  [code=3.50.50.60, no name defined]                                                                    2woiA01 A:-1-164,A:286-360  [code=3.50.50.60, no name defined]             2woiA03 A:361-472  [code=3.30.390.30, no name defined]                                                          ---------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..........hhhhhhh...eeee......................hhhhhhhhh..hhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhh.........eee.....eee..eeeee........eeeeeeeeeeee..................hhhhhh........eeee...hhhhhhh.hhhhhh.....eeeee.........hhhhhhhhhhhhhhh..eeee...eeeeee.....eeeee....eeee.eeee.......hhhhh......................................hhhhhhhh.hhhhhhhh...........................hhhhhhhhh.eeeeeeeee.hhhhhh.......eeeeeeee.........eee.....hhhhh...hhhhh.hhhhhhh.......hhhhhhh.....eeee...ee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2woi A  -1 SHMSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEKMEKLP 488
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488

Chain B from PDB  Type:PROTEIN  Length:487
 aligned with Q389T8_TRYB2 | Q389T8 from UniProtKB/TrEMBL  Length:492

    Alignment length:487
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       
         Q389T8_TRYB2     2 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEKMEKLP 488
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2woiB01 B:2-164,B:286-360  [code=3.50.50.60, no name defined]                                                                                                      2woiB02 B:165-285  [code=3.50.50.60, no name defined]                                                                    2woiB01 B:2-164,B:286-360  [code=3.50.50.60, no name defined]              2woiB03 B:361-472  [code=3.30.390.30, no name defined]                                                          ---------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.eeee..........hhhhhhh...eeee......................hhhhhhhhh..hhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhh.........eee.....eee..eeeee........eeeeeee..eee..................hhhhhh........eeee...hhhhhhh.hhhhhh.....eeeee.........hhhhhhhhhhhhhhh..eeee...eeeeee.....eeeee....eeee.eeee.......hhhhh..........................eee.........hhhhhhhh.hhhhhhhh...........................hhhhhhhhh.eeeeeeeee.hhhhhhh......eeeeeeee.........eee.............hhhhh.hhhhhhhh......hhhhhhh.....eeee...ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2woi B   2 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEKMEKLP 488
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481

Chain C from PDB  Type:PROTEIN  Length:484
 aligned with Q389T8_TRYB2 | Q389T8 from UniProtKB/TrEMBL  Length:492

    Alignment length:484
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482    
         Q389T8_TRYB2     3 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEKMEK 486
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2woiC01 C:3-164,C:286-360  [code=3.50.50.60, no name defined]                                                                                                     2woiC02 C:165-285  [code=3.50.50.60, no name defined]                                                                    2woiC01 C:3-164,C:286-360  [code=3.50.50.60, no name defined]              2woiC03 C:361-472  [code=3.30.390.30, no name defined]                                                          -------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee..........hhhhhhh...eeee......................hhhhhhhhh.hhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhh.........eee..........eeeee........eeeeeeeeeeee..................hhhhhh........eeee...hhhhhhh.hhhhhh.....eeeee.........hhhhhhhhhhhhhhh..eeee...eeeeee.....eeeee....eeee.eeee..................................................hhhhhhhh...hhhhhh...........................hhhhhhhhh.eeeeeeeee.hhhhhhh......eeeeeeee.........eee.............hhhhh.hhhhhhhh......hhhhhhh.....eeee...ee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2woi C   3 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEKMEK 486
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482

Chain D from PDB  Type:PROTEIN  Length:489
 aligned with Q389T8_TRYB2 | Q389T8 from UniProtKB/TrEMBL  Length:492

    Alignment length:489
                               1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
                               |     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477         
         Q389T8_TRYB2     - ---MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEKMEK 486
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2woiD01 D:-2-164,D:286-360  [code=3.50.50.60, no name defined]                                                                                                         2woiD02 D:165-285  [code=3.50.50.60, no name defined]                                                                    2woiD01 D:-2-164,D:286-360  [code=3.50.50.60, no name defined]             2woiD03 D:361-472  [code=3.30.390.30, no name defined]                                                          -------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeee..........hhhhhh....eeee......................hhhhhhhhh..hhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhh.........eee.....eee..eeeee........eeeeeeeeeeee..................hhhhhh........eeee...hhhhhhh.hhhhhh.....eeeee.........hhhhhhhhhhhhhhh..eeee...eeeeee.....eeeee....eeee.eeee..................................................hhhhhhhh.hhhhhhhh...........................hhhhhh....eeeeeeeee..hhhhhh......eeeeeeee.........eee...hhhhhh....hhhhh.hhhhhhh.......hhhhhhh.....eeee...ee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2woi D  -2 GSHMSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEKMEK 486
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2WOI)

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: Enolase-like; domain 1 (252)

Homologous Superfamily: [code=3.30.390.30, no name defined] (99)

Trypanosoma brucei. Organism_taxid: 5691. (1)

1a	2woiA03	A:361-472
1b	2woiB03	B:361-472
1c	2woiC03	C:361-472
1d	2woiD03	D:361-472

Architecture: 3-Layer(bba) Sandwich (528)

Topology: FAD/NAD(P)-binding domain (373)

Homologous Superfamily: [code=3.50.50.60, no name defined] (373)

Trypanosoma brucei. Organism_taxid: 5691. (1)

2a	2woiC01	C:3-164,C:286-360
2b	2woiB01	B:2-164,B:286-360
2c	2woiA01	A:-1-164,A:286-360
2d	2woiD01	D:-2-164,D:286-360
2e	2woiA02	A:165-285
2f	2woiB02	B:165-285
2g	2woiC02	C:165-285
2h	2woiD02	D:165-285

(no "Pfam Domain" information available for 2WOI)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (Q389T8_TRYB2 | Q389T8)

molecular function
	GO:0015036	disulfide oxidoreductase activity	Catalysis of the reaction: substrate with reduced sulfide groups = substrate with oxidized disulfide bonds.
	GO:0050660	flavin adenine dinucleotide binding	Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP.
	GO:0015042	trypanothione-disulfide reductase activity	Catalysis of the reaction: NADP+ + trypanothione = NADPH + H+ + trypanothione disulfide.
biological process
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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	2woi
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	Q389T8_TRYB2 \| Q389T8
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	1.8.1.12
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	Q389T8_TRYB2 \| Q389T8
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UniProtKB/TrEMBL
	Q389T8_TRYB2 \| Q389T8	:	2wov 2wow 2wp5 2wp6 2wpc 2wpe 2wpf 4nev

(no "Related Entries Specified in the PDB File" available for 2WOI)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 15)

Sites (15, 15)

SS Bonds (4, 4)

Cis Peptide Bonds (12, 12)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

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Exons (0, 0)

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Gene Ontology (9, 9)

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