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(-) Description

Title :  ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE IN P212121
 
Authors :  A. Razeto, F. Mattiroli, E. Carpanelli, A. Aliverti, V. Pandini, A. Cod A. Mattevi
Date :  07 Mar 07  (Deposition) - 26 Jun 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Transferase, Lavoprotein, Lipid Synthesis, Peroxisomal Disorder (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Razeto, F. Mattiroli, E. Carpanelli, A. Aliverti, V. Pandini, A. Coda, A. Mattevi
The Crucial Step In Ether Phospholipid Biosynthesis: Structural Basis Of A Noncanonical Reaction Associated With A Peroxisomal Disorder.
Structure V. 15 683 2007
PubMed-ID: 17562315  |  Reference-DOI: 10.1016/J.STR.2007.04.009

(-) Compounds

Molecule 1 - ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE
    Chains: A, B, C, D
    EC Number: 2.5.1.26
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: PLYS
    Fragment: RESIDUES 9-587
    Organism Common: SLIME MOLD
    Organism Scientific: DICTYOSTELIUM DISCOIDEUM
    Organism Taxid: 44689
    Other Details: ACADEMIA DNA SEQUENCING CENTER IN COLLABORATION WITH DICTYOSTELIUM CDNA PROJECT
    Strain: KASSX-3
    Synonym: ALKYL-DHAP SYNTHASE, ALKYLGLYCERONE-PHOSPHATE SYNTHASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1FAD4Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2PL34Ligand/IonHEXADECAN-1-OL
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2PL32Ligand/IonHEXADECAN-1-OL
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2PL32Ligand/IonHEXADECAN-1-OL

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:24 , PRO A:169 , GLY A:171 , GLY A:172 , GLY A:173 , SER A:174 , ASN A:175 , ILE A:176 , ALA A:179 , VAL A:214 , PRO A:236 , ASP A:237 , SER A:238 , SER A:242 , THR A:243 , GLY A:246 , TRP A:247 , ALA A:249 , THR A:250 , SER A:252 , SER A:253 , HIS A:255 , GLU A:301 , GLY A:302 , GLY A:305 , ILE A:306 , ILE A:307 , PRO A:444 , PL3 A:1588 , HOH A:2447 , HOH A:2480 , HOH A:2481 , HOH A:2482 , HOH A:2483BINDING SITE FOR RESIDUE FAD A1587
2AC2SOFTWARELEU A:63 , ILE A:176 , LEU A:443 , ILE A:446 , ARG A:447 , VAL A:459 , TRP A:492 , TYR A:508 , ILE A:510 , FAD A:1587 , HOH A:2484BINDING SITE FOR RESIDUE PL3 A1588
3AC3SOFTWARETRP B:24 , PRO B:169 , GLY B:171 , GLY B:172 , GLY B:173 , SER B:174 , ASN B:175 , ILE B:176 , ALA B:179 , VAL B:214 , PRO B:236 , ASP B:237 , SER B:238 , SER B:242 , THR B:243 , GLY B:246 , TRP B:247 , ALA B:249 , THR B:250 , SER B:252 , SER B:253 , HIS B:255 , GLU B:301 , GLY B:302 , GLY B:305 , ILE B:306 , ILE B:307 , PRO B:444 , ASN B:582 , PL3 B:1588 , HOH B:2380 , HOH B:2381 , HOH B:2382 , HOH B:2383 , HOH B:2384BINDING SITE FOR RESIDUE FAD B1587
4AC4SOFTWAREPHE B:58 , LEU B:63 , LEU B:361 , LEU B:443 , ARG B:447 , LEU B:450 , VAL B:459 , TYR B:508 , FAD B:1587 , HOH B:2385BINDING SITE FOR RESIDUE PL3 B1588
5AC5SOFTWARETRP C:24 , PRO C:169 , GLY C:171 , GLY C:172 , GLY C:173 , SER C:174 , ASN C:175 , ALA C:179 , VAL C:214 , PRO C:236 , ASP C:237 , SER C:238 , SER C:242 , THR C:243 , GLY C:246 , TRP C:247 , ALA C:249 , THR C:250 , SER C:252 , SER C:253 , HIS C:255 , GLU C:301 , GLY C:302 , GLY C:305 , ILE C:306 , ILE C:307 , ASN C:582 , PL3 C:1587 , HOH C:2330 , HOH C:2331 , HOH C:2332 , HOH C:2333BINDING SITE FOR RESIDUE FAD C1586
6AC6SOFTWARELEU C:443 , VAL C:459 , TYR C:508 , FAD C:1586BINDING SITE FOR RESIDUE PL3 C1587
7AC7SOFTWARETRP D:24 , PRO D:169 , GLY D:171 , GLY D:172 , GLY D:173 , SER D:174 , ASN D:175 , ILE D:176 , ALA D:179 , VAL D:214 , PRO D:236 , ASP D:237 , SER D:238 , SER D:242 , THR D:243 , GLY D:246 , TRP D:247 , ALA D:249 , THR D:250 , SER D:252 , SER D:253 , HIS D:255 , GLU D:301 , GLY D:302 , GLY D:305 , ILE D:307 , PRO D:444 , PL3 D:1587 , HOH D:2323 , HOH D:2342 , HOH D:2344BINDING SITE FOR RESIDUE FAD D1586
8AC8SOFTWARELEU D:443 , TRP D:492 , TYR D:508 , FAD D:1586 , HOH D:2347BINDING SITE FOR RESIDUE PL3 D1587

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2UUU)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Lys A:35 -Pro A:36
2Lys B:35 -Pro B:36
3Lys C:35 -Pro C:36
4Lys D:35 -Pro D:36

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2UUU)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FAD_PCMHPS51387 PCMH-type FAD-binding domain profile.ADAS_DICDI137-317
 
 
 		  4A:137-317
B:137-317
C:137-317
D:137-317
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FAD_PCMHPS51387 PCMH-type FAD-binding domain profile.ADAS_DICDI137-317
 
 
 		  2A:137-317
B:137-317
-
-
Biological Unit 2 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FAD_PCMHPS51387 PCMH-type FAD-binding domain profile.ADAS_DICDI137-317
 
 
 		  2-
-
C:137-317
D:137-317

(-) Exons   (0, 0)

(no "Exon" information available for 2UUU)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:550
 aligned with ADAS_DICDI | O96759 from UniProtKB/Swiss-Prot  Length:611

    Alignment length:586
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580      
           ADAS_DICDI     1 MSGEKKEYPKEHIDLYQQIKWNGWGDTRKFLHQLKPSGTIAMTTPEVSSVPLPSLRGFIKKELTLPGEEDKPFVLDETPALQIENIHVDPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRYATRGWINVYRSLKETIDPKDICNPRKL 586
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...-----.....hhhhhh..........eeee......eeee......ee..hhhhhhhhhh.------...........hhhhh.......hhhhhhhhhh..hhh.ee.hhhhhhhh....hhhhhhhhhh........eee...hhhhhhhhhhhhhhhh.eeeee..................eeeee......eeeee....eeeee...hhhhhhhhhhhh.ee......hhhhhhhhhhhhhh....hhhhhhhhhhheeeeeeee..eee...-------...hhhhhh.......eeeeeeee.ee...eeeeeeeee.hhhhhhhhhhhhhhhh....eeeeehhhhhhhhhhh.........hhhhhhhhhhhhh........eeeeeeeeehhhhhhhhhhhhhhhhhh...eeeeee..hhhhhh..hhhhhhhhhhh..eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhh....eeeeeeeeeee..eeeeeeeeeee......hhhhhhhhhhhhhhhhhh.....------------------.hhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------FAD_PCMH  PDB: A:137-317 UniProt: 137-317                                                                                                                                            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2uuu A  -3 MGS-----PKEHIDLYQQIKWNGWGDTRKFLHQLKPSGTIAMTTPEVSSVPLPSLRGFIKKELT------KPFVLDETPALQIENIHVDPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELR-------GINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLS------------------RGWINVYRSLKETIDPKDICNPRKL 586
                              |     10        20        30        40        50        60   |     -|       80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280 |     290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540  |      -         - |     570       580      
                             -1     9                                                     64     71                                                                                                                                                                                                                282     290                                                                                                                                                                                                                                                          543                562                        


Chain B from PDB  Type:PROTEIN  Length:540
 aligned with ADAS_DICDI | O96759 from UniProtKB/Swiss-Prot  Length:611

    Alignment length:575
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581     
           ADAS_DICDI    12 HIDLYQQIKWNGWGDTRKFLHQLKPSGTIAMTTPEVSSVPLPSLRGFIKKELTLPGEEDKPFVLDETPALQIENIHVDPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRYATRGWINVYRSLKETIDPKDICNPRKL 586
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhh..........eeee......eeee......eehhhhhhhhhhhh.-------..........hhhhh.......hhhhhhhhhh..hhh.ee.hhhhhhhh....hhhhhhhhhh........eee...hhhhhhhhhhhhhhhh.eeeee..................eeeee.hhh..eeeee....eeeee...hhhhhhhhhhhh.ee......hhhhhhhhhhhhhh....hhhhhhhhhhheeeeeeee..eee....----.....hhhhhh.......eeeeeeee.ee...eeeeeeeee.hhhhhhhhhhhhhhhh....eeeeehhhhhhhhhh...-----hhhhhhhhhhhhhhhhhh.....eeeeeeeeehhhhhhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhhhhhh.eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhh....eeeeeeeeeee..eeeeeeeeeee...--.hhhhhhhhhhhhhhhhhh.....-----------------..hhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------FAD_PCMH  PDB: B:137-317 UniProt: 137-317                                                                                                                                            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2uuu B  12 HIDLYQQIKWNGWGDTRKFLHQLKPSGTIAMTTPEVSSVPLPSLRGFIKKELT-------PFVLDETPALQIENIHVDPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRN----GAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKP-----SEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNE--DMAQYIEAKKLMTDIIFKYGGSLS-----------------TRGWINVYRSLKETIDPKDICNPRKL 586
                                    21        31        41        51        61  |      -|       81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 |    |291       301       311       321       331       341       351       361     |   - |     381       391       401       411       421       431       441       451       461       471       481       491       501       511     | 521       531       541 |       -       561       571       581     
                                                                               64      72                                                                                                                                                                                                                283  288                                                                            367   373                                                                                                                                             517  |                    543               561                         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      520                                                                  


Chain C from PDB  Type:PROTEIN  Length:541
 aligned with ADAS_DICDI | O96759 from UniProtKB/Swiss-Prot  Length:611

    Alignment length:574
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581    
           ADAS_DICDI    12 HIDLYQQIKWNGWGDTRKFLHQLKPSGTIAMTTPEVSSVPLPSLRGFIKKELTLPGEEDKPFVLDETPALQIENIHVDPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRYATRGWINVYRSLKETIDPKDICNPRK 585
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh...........eeee......eeee......ee..hhhhhhhhhh..................hhhhh.......hhhhhhhhhhhhhhh.ee.hhhhhhhh....hhhhhhhhhh........eee...hhhhhhhhhhhhhhhh.eeeee..................eeeee.hhh..eeeee....eeeee...hhhhhhhhhhhh.ee......hhhhhhhhhhhhhh....hhhhhhhhhhheeeeeeee..eee....----.....hhhhhh.......eeeeeeee.ee...eeeeeeeee.hhhhhhhhhhhhhhhh....eeeeehhhhhhhhhhh...-----hhhhhhhhhhhhhh........eeeeeeeeehhhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhh....eeeeeeeeeee..eeeeeeeeeee...------hhhhhhhhhhhhhhh.....------------------.hhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------FAD_PCMH  PDB: C:137-317 UniProt: 137-317                                                                                                                                            ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2uuu C  12 HIDLYQQIKWNGWGDTRKFLHQLKPSGTIAMTTPEVSSVPLPSLRGFIKKELTLPGEEDKPFVLDETPALQIENIHVDPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRN----GAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPS-----EFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNE------YIEAKKLMTDIIFKYGGSLS------------------RGWINVYRSLKETIDPKDICNPRK 585
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 |    |291       301       311       321       331       341       351       361      |  -  |    381       391       401       411       421       431       441       451       461       471       481       491       501       511     |   -  |    531       541 |       -         -|      571       581    
                                                                                                                                                                                                                                                                                                         283  288                                                                             368   374                                                                                                                                            517    524                543                562                       


Chain D from PDB  Type:PROTEIN  Length:537
 aligned with ADAS_DICDI | O96759 from UniProtKB/Swiss-Prot  Length:611

    Alignment length:583
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582   
           ADAS_DICDI     3 GEKKEYPKEHIDLYQQIKWNGWGDTRKFLHQLKPSGTIAMTTPEVSSVPLPSLRGFIKKELTLPGEEDKPFVLDETPALQIENIHVDPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRYATRGWINVYRSLKETIDPKDICNPRK 585
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) - ----------------------------------------------------------          --------------------------------------------------------------------FAD_binding_4-2uuuD05 D:141-282                                                                                                                     ----------------------------FAD-oxidase_C-2uuuD01 D:317-585                                                                                                                                                                                                                                               Pfam domains (1)
           Pfam domains (2) - ----------------------------------------------------------          --------------------------------------------------------------------FAD_binding_4-2uuuD06 D:141-282                                                                                                                     ----------------------------FAD-oxidase_C-2uuuD02 D:317-585                                                                                                                                                                                                                                               Pfam domains (2)
           Pfam domains (3) - ----------------------------------------------------------          --------------------------------------------------------------------FAD_binding_4-2uuuD07 D:141-282                                                                                                                     ----------------------------FAD-oxidase_C-2uuuD03 D:317-585                                                                                                                                                                                                                                               Pfam domains (3)
           Pfam domains (4) - ----------------------------------------------------------          --------------------------------------------------------------------FAD_binding_4-2uuuD08 D:141-282                                                                                                                     ----------------------------FAD-oxidase_C-2uuuD04 D:317-585                                                                                                                                                                                                                                               Pfam domains (4)
         Sec.struct. author .-.........hhhhh...........eeee......eeee......eehhhhhhhhhhh----------.........hhhhh.......hhhhhhhhh...hhh.ee.hhhhhhhh....hhhhhhhhhhh.......eee...hhhhhhhhhhhhhhhh.eeeee..................eeeee......eeeee....eeeee...hhhhhhhhhhh..ee......hhhhhhhhhhhhhh....hhhhhhhhhhheeeeeeee..eee...------....hhhhhh.......eeeeeeee.ee...eeeeeeeee.hhhhhhhhhhhhhhhh....eeeeehhhhhhhhhhh...----hhhhhhhhhhhhhhh........eeeeeeeeehhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhh.eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhh....eeeeeeeeeee..eeeeeeeeeee..-----hhhhhhhhhhhhhhhh.....--------------------hhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------FAD_PCMH  PDB: D:137-317 UniProt: 137-317                                                                                                                                            ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2uuu D  -5 G-AMGSPKEHIDLYQQIKWNGWGDTRKFLHQLKPSGTIAMTTPEVSSVPLPSLRGFIKKE----------FVLDETPALQIENIHVDPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELR------AGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPS----SEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQN-----AQYIEAKKLMTDIIFKYGGSL--------------------GWINVYRSLKETIDPKDICNPRK 585
                            | |  || 12        22        32        42        52        62         -|       82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282      |292       302       312       322       332       342       352       362     |   -|      382       392       402       412       422       432       442       452       462       472       482       492       502       512   |   522       532       542         -         -|      572       582   
                           -5 | -1|                                                   62         73                                                                                                                                                                                                              282    289                                                                            368  373                                                                                                                                            516   522                 542                  563                      
                             -4   9
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2UUU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2UUU)

(-) Pfam Domains  (2, 8)

Asymmetric Unit
(-)
Clan: FAD-oxidase_C (26)
(-)
Clan: FAD_PCMH (53)

(-) Gene Ontology  (14, 14)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (ADAS_DICDI | O96759)
molecular function
    GO:0071949    FAD binding    Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
    GO:0043178    alcohol binding    Interacting selectively and non-covalently with an alcohol, any of a class of alkyl compounds containing a hydroxyl group.
    GO:0008609    alkylglycerone-phosphate synthase activity    Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0050660    flavin adenine dinucleotide binding    Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016614    oxidoreductase activity, acting on CH-OH group of donors    Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0008611    ether lipid biosynthetic process    The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.
    GO:0008610    lipid biosynthetic process    The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0044351    macropinocytosis    An endocytosis process that results in the uptake of liquid material by cells from their external environment by the 'ruffling' of the cell membrane to form heterogeneously sized intracellular vesicles called macropinosomes, which can be up to 5 micrometers in size.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005777    peroxisome    A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

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  2uuu
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  ADAS_DICDI | O96759
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  2.5.1.26
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ADAS_DICDI | O96759: 2uuv

(-) Related Entries Specified in the PDB File

2uuv ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE P1