2RRR - JenaLib

Title :   DNA OLIGOMER CONTAINING ETHYLENE CROSS-LINKED CYCLIC 2'-DEOXYURIDYLATE DIMER

Authors :   K. Furuita, S. Murata, J. G. Jee, S. Ichikawa, A. Matsuda, C. Kojima

Date :   24 Mar 11 (Deposition) - 08 Jun 11 (Release) - 08 Jun 11 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A,B  (20x)
NMR Structure *: A,B  (1x)

Keywords :   Dna, Nucleic Acid, Deoxyuridylate, Bent Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Furuita, S. Murata, J. G. Jee, S. Ichikawa, A. Matsuda, C. Kojima
Structural Feature Of Bent Dna Recognized By Hmgb1
J. Am. Chem. Soc. V. 133 5788 2011
PubMed-ID: 21443191 | Reference-DOI: 10.1021/JA2013399

Compounds

*Molecule 1 - DNA (5'-D(CPCPTPTPCPAPTPTPAPCPAPTPCPC)-3')*
	Chains	:	A
	Engineered	:	YES
	Synthetic	:	YES

*Molecule 2 - DNA (5'-D(GPGPAPTPGPTPAPAPTPGPAPAPGPG)-3')*
	Chains	:	B
	Engineered	:	YES
	Synthetic	:	YES

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

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Exons (0, 0)

Sequences/Alignments

NMR Structure

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Chain A from PDB  Type:DNA  Length:14
                                             
                  2rrr A  1 CCTTCATTACATCC 14
                                    10

Chain B from PDB  Type:DNA  Length:14
                                             
                  2rrr B 15 GGATGTAATGAAGG 28
                                    24

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Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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