Chain A from PDB Type:PROTEIN Length:429
aligned with RBLL2_RHOPA | Q6ND47 from UniProtKB/Swiss-Prot Length:432
Alignment length:429
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420
RBLL2_RHOPA 1 MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSVPVECAARGPVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVPDHAASHPELAAALRAF 429
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2qygA01 A:1-145 [code=3.30.70.150, no name defined] 2qygA02 A:146-429 Rubisco CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhh.hhhhhhhh.eeeeeeeeeee.hhhhhhhhhhhhhh............hhhhhh.eeeeeeeee................eeeeeeeeeee.hhh..hhhhhhhhhhhhhhhh.....eeeeeeee.hhhhhh......hhhhhhhhhhh.....eeeee........hhhhhhhhhhhhhhh..eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhh.....eeee..hhhhhhh....eehhhhhhhhhhhhh..eeee...hhhhh.hhhhhhhhhhhhhh........eeee.......hhhhhhhhhh....ee...........hhhhhhhhhhhhhhhhhh..hhhhhhh.hhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2qyg A 1 MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSVPVECAARGPVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVPDHAASHPELAAALRAF 429
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420
Chain B from PDB Type:PROTEIN Length:429
aligned with RBLL2_RHOPA | Q6ND47 from UniProtKB/Swiss-Prot Length:432
Alignment length:429
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420
RBLL2_RHOPA 1 MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSVPVECAARGPVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVPDHAASHPELAAALRAF 429
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2qygB01 B:1-145 [code=3.30.70.150, no name defined] 2qygB02 B:146-429 Rubisco CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhh.hhhhhhhh.eeeeeeeeeee.hhhhhhhhhhhhhh............hhhhhh.eeeeeeeee................eeeeeeeeeee.hhh..hhhhhhhhhhhhhhhh.....eeeeeeee.hhhhhh......hhhhhhhhhhh.....eeeee........hhhhhhhhhhhhhhh..eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhh.....eeee..hhhhhhh....eehhhhhhhhhhhhh..eeee...hhhhh.hhhhhhhhhhhhhh........eeee.......hhhhhhhhhh....ee...........hhhhhhhhhhhhhhhhhh..hhhhhhh.hhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2qyg B 1 MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSVPVECAARGPVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVPDHAASHPELAAALRAF 429
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420
Chain C from PDB Type:PROTEIN Length:429
aligned with RBLL2_RHOPA | Q6ND47 from UniProtKB/Swiss-Prot Length:432
Alignment length:429
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420
RBLL2_RHOPA 1 MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSVPVECAARGPVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVPDHAASHPELAAALRAF 429
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2qygC01 C:1-145 [code=3.30.70.150, no name defined] 2qygC02 C:146-429 Rubisco CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhh.hhhhhhhh.eeeeeeeeeee.hhhhhhhhhhhhhh............hhhhhh.eeeeeeeee................eeeeeeeeeee.hhh..hhhhhhhhhhhhhhhh.....eeeeeeee.hhhhhh......hhhhhhhhhhh.....eeeee........hhhhhhhhhhhhhhh..eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhh.....eeee..hhhhhhh....eehhhhhhhhhhhhh..eeee...hhhhh.hhhhhhhhhhhhhh........eeee.......hhhhhhhhhh....ee...........hhhhhhhhhhhhhhhhhh..hhhhhh..hhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2qyg C 1 MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSVPVECAARGPVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVPDHAASHPELAAALRAF 429
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420
Chain D from PDB Type:PROTEIN Length:429
aligned with RBLL2_RHOPA | Q6ND47 from UniProtKB/Swiss-Prot Length:432
Alignment length:429
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420
RBLL2_RHOPA 1 MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSVPVECAARGPVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVPDHAASHPELAAALRAF 429
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2qygD01 D:1-145 [code=3.30.70.150, no name defined] 2qygD02 D:146-429 Rubisco CATH domains
Pfam domains (1) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RuBisCO_large-2qygD01 D:345-429 Pfam domains (1)
Pfam domains (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RuBisCO_large-2qygD02 D:345-429 Pfam domains (2)
Pfam domains (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RuBisCO_large-2qygD03 D:345-429 Pfam domains (3)
Pfam domains (4) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RuBisCO_large-2qygD04 D:345-429 Pfam domains (4)
Pfam domains (5) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RuBisCO_large-2qygD05 D:345-429 Pfam domains (5)
Pfam domains (6) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RuBisCO_large-2qygD06 D:345-429 Pfam domains (6)
Pfam domains (7) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RuBisCO_large-2qygD07 D:345-429 Pfam domains (7)
Pfam domains (8) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RuBisCO_large-2qygD08 D:345-429 Pfam domains (8)
Sec.struct. author ..hhhhhhhh.hhhhhhhh.eeeeeeeeeee.hhhhhhhhhhhhhh............hhhhhh.eeeeeeeee................eeeeeeeeeee.hhh..hhhhhhhhhhhhhhhh.....eeeeeeee.hhhhhh......hhhhhhhhhhh.....eeeee........hhhhhhhhhhhhhhh..eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhh.....eeee..hhhhhhh....eehhhhhhhhhhhhh..eeee...hhhhh.hhhhhhhhhhhhhh........eeee.......hhhhhhhhhh....ee...........hhhhhhhhhhhhhhhhhh..hhhhhhh.hhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2qyg D 1 MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSVPVECAARGPVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVPDHAASHPELAAALRAF 429
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |