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(-) Description

Title :  CRYSTAL STRUCTURE OF F. TULARENSIS PATHOGENICITY ISLAND PROTEIN C
 
Authors :  P. Sun, B. P. Austin, F. D. Schubot, D. S. Waugh
Date :  10 Aug 07  (Deposition) - 16 Oct 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.65
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Francisella Tularensis, Structure, Iglc, Cell Invasion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Sun, B. P. Austin, F. D. Schubot, D. S. Waugh
Crystal Structure Of Francisella Tularensis Pathogenicity Island Protein Iglc
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - INTRACELLULAR GROWTH LOCUS, SUBUNIT C
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: B834(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: IGLC2, IGLC1
    Mutation: YES
    Organism Scientific: FRANCISELLA TULARENSIS SUBSP. TULARENSIS
    Organism Taxid: 119856
    Strain: SUBSP. TULARENSIS

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 16)

Asymmetric Unit (1, 16)
No.NameCountTypeFull Name
1MSE16Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2QWU)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2QWU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2QWU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2QWU)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2QWU)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:207
 aligned with Q5NEC5_FRATT | Q5NEC5 from UniProtKB/TrEMBL  Length:211

    Alignment length:207
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       
         Q5NEC5_FRATT     3 MSEMITRQQVTSGETIHVRTDPTACIGSHPNCRLFIDSLTIAGEKLDKNIVAIDGGEDVTKADSATAAASVIRLSITPGSINPTISITLGVLIKSNVRTKIEEKVSSILQASATDMKIKLGNSNKKQEYKTDEAWGIMIDLSNLELYPISAKAFSISIEPTELMGVSKDGMRYHIISIDGLTTSQGSLPVCCAASTDKGVAKIGYIA 209
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhh..eeee...............ee..eee..ee............hhhhh......eeeeeeeee......eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhh.eee.......ee.....ee........eeee......eeeeee..........eeeeeeeeeeee....eeeee......eeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qwu A   3 mSEmITRQQVTSGETIHVRTDPTACIGSHPNCRmFIDSLTIAGEKLDKNIVAIDGGEDVTKADSATAAASVIRmSITPGSINPTISITLGVLIKSNVRTKIEEKVSSILQASATDmKIKLGNSNKKQEYKTDEAWGImIDLSNLELYPISAKAFSISIEPTELmGVSKDGmRYHIISIDGLTTSQGSLPVCCAASTDKGVAKIGYIA 209
                            |  |    12        22        32   |    42        52        62        72   |    82        92       102       112     | 122       132       142       152       162   |   172|      182       192       202       
                            |  |                            36-MSE                                  76-MSE                                   118-MSE               140-MSE                   166-MSE  |                                    
                            3-MSE                                                                                                                                                                   173-MSE                                
                               6-MSE                                                                                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:207
 aligned with Q5NEC5_FRATT | Q5NEC5 from UniProtKB/TrEMBL  Length:211

    Alignment length:207
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       
         Q5NEC5_FRATT     3 MSEMITRQQVTSGETIHVRTDPTACIGSHPNCRLFIDSLTIAGEKLDKNIVAIDGGEDVTKADSATAAASVIRLSITPGSINPTISITLGVLIKSNVRTKIEEKVSSILQASATDMKIKLGNSNKKQEYKTDEAWGIMIDLSNLELYPISAKAFSISIEPTELMGVSKDGMRYHIISIDGLTTSQGSLPVCCAASTDKGVAKIGYIA 209
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) IglC-2qwuB01 B:3-209                                                                                                                                                                                            Pfam domains (1)
           Pfam domains (2) IglC-2qwuB02 B:3-209                                                                                                                                                                                            Pfam domains (2)
         Sec.struct. author .....hhhhhhh...eeee...............ee..eee..ee............hhhhh......eeeeeeeee......eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh.eee.......ee.....ee........eeee......eeeeee...........eeeeeeeeeee....eeeee......eeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qwu B   3 mSEmITRQQVTSGETIHVRTDPTACIGSHPNCRmFIDSLTIAGEKLDKNIVAIDGGEDVTKADSATAAASVIRmSITPGSINPTISITLGVLIKSNVRTKIEEKVSSILQASATDmKIKLGNSNKKQEYKTDEAWGImIDLSNLELYPISAKAFSISIEPTELmGVSKDGmRYHIISIDGLTTSQGSLPVCCAASTDKGVAKIGYIA 209
                            |  |    12        22        32   |    42        52        62        72   |    82        92       102       112     | 122       132       142       152       162   |   172|      182       192       202       
                            3-MSE                           36-MSE                                  76-MSE                                   118-MSE               140-MSE                   166-MSE  |                                    
                               6-MSE                                                                                                                                                                173-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2QWU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2QWU)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: no clan defined [family: IglC] (1)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2QWU)

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