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(-) Description

Title :  ANCESTRAL CORTICOID RECEPTOR IN COMPLEX WITH ALDOSTERONE
 
Authors :  E. A. Ortlund, J. T. Bridgham, M. R. Redinbo, J. W. Thornton
Date :  24 May 07  (Deposition) - 04 Sep 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Nuclear Receptor, Ligand Binding Domain, Aldosterone, Evolution, Ancient Protein, Epistasis, Unknown Function, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. A. Ortlund, J. T. Bridgham, M. R. Redinbo, J. W. Thornton
Crystal Structure Of An Ancient Protein: Evolution By Conformational Epistasis.
Science V. 317 1544 2007
PubMed-ID: 17702911  |  Reference-DOI: 10.1126/SCIENCE.1142819

(-) Compounds

Molecule 1 - ANCCR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMALCH10T
    Expression System Strain: BL21PLYSS
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: UNIDENTIFIED
    Organism Taxid: 32644

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 5)

Asymmetric/Biological Unit (3, 5)
No.NameCountTypeFull Name
1AS41Ligand/IonALDOSTERONE
2GOL2Ligand/IonGLYCEROL
3NA2Ligand/IonSODIUM ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:60 , THR A:63BINDING SITE FOR RESIDUE NA A 248
2AC2SOFTWAREGLN A:117 , GLN A:120 , GLU A:121BINDING SITE FOR RESIDUE NA A 249
3AC3SOFTWARELEU A:32 , ASN A:33 , GLN A:39 , ARG A:80 , MET A:115 , PHE A:204 , CYS A:205 , THR A:208 , VAL A:217 , PHE A:219BINDING SITE FOR RESIDUE AS4 A 301
4AC4SOFTWAREMET A:103 , GLN A:104 , ALA A:107 , MET A:108 , TYR A:109 , ILE A:163 , LYS A:164 , ARG A:167 , PHE A:184 , HOH A:512BINDING SITE FOR RESIDUE GOL A 403
5AC5SOFTWAREHIS A:84 , PRO A:232 , ALA A:236 , HOH A:485BINDING SITE FOR RESIDUE GOL A 404

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2Q1H)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2Q1H)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2Q1H)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2Q1H)

(-) Exons   (0, 0)

(no "Exon" information available for 2Q1H)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:244
                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2q1hA00 A:0-246 Retinoid X Receptor                                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..eeehhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.eee.....hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..eee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q1h A   0 FLISILEAIEPEVVYAGYDNSQPDTTNYLLSSLNRLAGKQMVSVVKWAKALPGFRNLHLDDQMTLIQYSWMSLMAFSLGWRSYKHTNGQMLYFAPDLIFNEERMQQSAMYDLCQGMRQISQEFVRLQVTYEEFLCMKVLLLLSTVPKDGLKSQASFDEMRMNYIKELRRAIANNSSQNWQRFYQLTKLLDSMHDLVGGLLQFCFYTFVQSQALSVEFPEMLVEIISDQLPKVMAGMAKPLLFHK 246
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169 ||    182       192       202       212       222       232       242    
                                                                                                                                                                                                     171|                                                                       
                                                                                                                                                                                                      175
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2Q1H)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2Q1H)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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