2PN2 - JenaLib

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Title :   CRYSTAL STRUCTURE OF A PUTATIVE OSMOTIC STRESS INDUCED AND DETOXIFICATION RESPONSE PROTEIN (PSYC_0566) FROM PSYCHROBACTER ARCTICUS 273-4 AT 2.15 A RESOLUTION

Authors :   Joint Center For Structural Genomics (Jcsg)

Date :   23 Apr 07 (Deposition) - 08 May 07 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.95

Chains :   Asym. Unit : A
Biol. Unit 1: A  (2x)

Keywords :   Putative Osmotic Stress Induced And Detoxification Response Protein, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Uncharacterized Protein (Yp_263861. 1) From Psychrobacter Arcticus 273-4 At 2. 15 A Resolution
To Be Published
PubMed: search

Molecule 1 - UNCHARACTERIZED PROTEIN
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	SPEEDET
	Expression System Strain	:	HK100
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	YP_263861.1, PSYC_0566
	Organism Scientific	:	PSYCHROBACTER ARCTICUS
	Organism Taxid	:	259536
	Strain	:	273-4

		1
Asymmetric Unit	:	A
Biological Unit 1 (2x)	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 7)

No.	Name	Count	Type	Full Name
1	CL	2	Ligand/Ion	CHLORIDE ION
2	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 10)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	MSE	8	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	2	Ligand/Ion	SULFATE ION

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASP A:11	BINDING SITE FOR RESIDUE CL A 137
2	AC2	SOFTWARE	ARG A:85	BINDING SITE FOR RESIDUE CL A 138
3	AC3	SOFTWARE	PRO A:30 , SER A:41 , PRO A:42 , THR A:43 , LYS A:78 , ARG A:85 , HOH A:202	BINDING SITE FOR RESIDUE SO4 A 139

(no "SS Bond" information available for 2PN2)

Asymmetric Unit

No.	Residues
1	Asp A:83	-	Pro A:84

(no "SAP(SNP)/Variant" information available for 2PN2)

(no "PROSITE Motif" information available for 2PN2)

(no "Exon" information available for 2PN2)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:137
 aligned with Q4FU81_PSYA2 | Q4FU81 from UniProtKB/TrEMBL  Length:136

    Alignment length:137
                                 1                                                                                                                                   
                                 |   5        15        25        35        45        55        65        75        85        95       105       115       125       
         Q4FU81_PSYA2     - -----MTTSKVTYQGDLRTSAIHLQSNNEIITDAPVDNQGKGEAFSPTDLLATSLASCMLTIIGIKARDMEIDIAGTTAEVTKVMAADPRRVSEVHIAITFNQELDDKTQKIFYNTALTCPVAKSIHPDIFQKVIIH 132
               SCOP domains -----d2pn2a1 A:1-132 Uncharacterized protein Psyc0566                                                                                     SCOP domains
               CATH domains 2pn2A00 A:-4-132  [code=3.30.300.20, no name defined]                                                                                     CATH domains
               Pfam domains ---------------------------------------OsmC-2pn2A01 A:35-129                                                                          --- Pfam domains
         Sec.struct. author ........eeeeeee..eeeeee....eeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeeeee....eeeeeeeeee.....hhhhhhhhhhhhhh...........eeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2pn2 A  -4 LYFQGmTTSKVTYQGDLRTSAIHLQSNNEIITDAPVDNQGKGEAFSPTDLLATSLASCmLTIIGIKARDmEIDIAGTTAEVTKVmAADPRRVSEVHIAITFNQELDDKTQKIFYNTALTCPVAKSIHPDIFQKVIIH 132
                                 |   5        15        25        35        45        55        65        75    |   85        95       105       115       125       
                                 1-MSE                                               54-MSE     65-MSE         80-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

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Folds(

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Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

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Class: Alpha and beta proteins (a+b) (23004)

Fold: OsmC-like (20)

Superfamily: OsmC-like (20)

Family: Ohr/OsmC resistance proteins (13)

Protein domain: Uncharacterized protein Psyc0566 (1)

Psychrobacter arcticus 273-4 [TaxId: 259536] (1)

d2pn2a1

A:1-132

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

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Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: GMP Synthetase; Chain A, domain 3 (192)

Homologous Superfamily: [code=3.30.300.20, no name defined] (129)

Psychrobacter arcticus 273-4. Organism_taxid: 259536. Strain: 273-4. (1)

2pn2A00

A:-4-132

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: OsmC] (11)

Family: OsmC (11)

Psychrobacter arcticus (strain DSM 17307 / 273-4) (1)

OsmC-2pn2A01

A:35-129

Asymmetric Unit(hide GO term definitions)

(no "Gene Ontology" information available for 2PN2)

Asymmetric Unit
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	Cis Peptide Bonds
		Asp A:83 - Pro A:84	[ RasMol ]

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		Biological Unit 1	[ Jena3D ]

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Description

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Ligands, Modified Residues, Ions (3, 7)

Sites (3, 3)

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

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SAPs(SNPs)/Variants (0, 0)

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