Chain A from PDB Type:PROTEIN Length:291
aligned with GLSA_GEOKA | Q5KY26 from UniProtKB/Swiss-Prot Length:308
Alignment length:307
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
GLSA_GEOKA 2 LVYNQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEPTDYPFHSIAKLEEKPAKPLNPMINAGALVVTSMIQGGSVSERLERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCAIEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSIF 308
SCOP domains d2pbya_ A: automated matches SCOP domains
CATH domains 2pbyA01 A:2-61,A:200-302 Probable glutaminase ybgj; domain 12pbyA02 A:62-199 [code=1.10.15 00.10, no name defined] 2pbyA01 A:2-61,A:200-302 Probable glutaminase ybgj; domain 1 ------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhh.....hhhhhhh.....eeeeee...eeeeee.....ee..hhhhhhhhhhhhhhhhhhhhhhhh....----------------......hhhhhhhhhh.....hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eehhhhhhhhhhhhhh............hhhhhhhhhhhhhhh....hhhhhhhhh...eee....eeeeee...eeeeee.........hhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pby A 2 LVYNQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEP----------------KPLNPMINAGALVVTSMIQGGSVSERLERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCAIEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSIF 308
11 21 31 41 51 61 71 81 91| - 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
92 109
Chain B from PDB Type:PROTEIN Length:290
aligned with GLSA_GEOKA | Q5KY26 from UniProtKB/Swiss-Prot Length:308
Alignment length:305
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303
GLSA_GEOKA 4 YNQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEPTDYPFHSIAKLEEKPAKPLNPMINAGALVVTSMIQGGSVSERLERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCAIEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSIF 308
SCOP domains d2pbyb_ B: automated matches SCOP domains
CATH domains 2pbyB01 B:4-60,B:200-302 2pbyB02 B:61-199 [code=1.10.150 0.10, no name defined] 2pbyB01 B:4-60,B:200-302 Probable glutaminase ybgj; domain 1 ------ CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhh.....hhhhhhh.....eeeee.....eeeee....ee...hhhhhhhhhhhhhhhhhhhhhhh.....---------------.......hhhhhhhhhhh....hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eehhhhhhhhhhhhhh............hhhhhhhhhhhhhhh.hhhhhhhhhhhh...eee....eeeeee...eeeeee.........hhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pby B 4 YNQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEP---------------AKPLNPMINAGALVVTSMIQGGSVSERLERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCAIEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSIF 308
13 23 33 43 53 63 73 83 |- - | 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303
92 108
Chain C from PDB Type:PROTEIN Length:288
aligned with GLSA_GEOKA | Q5KY26 from UniProtKB/Swiss-Prot Length:308
Alignment length:304
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303
GLSA_GEOKA 4 YNQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEPTDYPFHSIAKLEEKPAKPLNPMINAGALVVTSMIQGGSVSERLERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCAIEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSI 307
SCOP domains d2pbyc_ C: automated matches SCOP domains
CATH domains 2pbyC01 C:4-61,C:200-302 2pbyC02 C:62-199 [code=1.10.15 00.10, no name defined] 2pbyC01 C:4-61,C:200-302 Probable glutaminase ybgj; domain 1 ----- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhh.....hhhhhhh.....eeeee.....eeeee.....ee...hhhhhhhhhhhhhhhhhhhhhhh....----------------......hhhhhhhhhhh....hhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhheeehhhhhhhhhhhhhh............hhhhhhhhhhhhhhh....hhhhhhhhh...eee....eeeeee...eeeeee.........hhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pby C 4 YNQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEP----------------KPLNPMINAGALVVTSMIQGGSVSERLERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCAIEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSI 307
13 23 33 43 53 63 73 83 |- - | 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303
92 109
Chain D from PDB Type:PROTEIN Length:286
aligned with GLSA_GEOKA | Q5KY26 from UniProtKB/Swiss-Prot Length:308
Alignment length:304
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304
GLSA_GEOKA 5 NQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEPTDYPFHSIAKLEEKPAKPLNPMINAGALVVTSMIQGGSVSERLERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCAIEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSIF 308
SCOP domains d2pbyd_ D: automated matches SCOP domains
CATH domains 2pbyD01 D:5-61,D:200-302 2pbyD02 D:62-199 [code=1.10.15 00.10, no name defined] 2pbyD01 D:5-61,D:200-302 Probable glutaminase ybgj; domain 1 ------ CATH domains
Pfam domains (1) ------------------Glutaminase-2pbyD01 D:23-308 Pfam domains (1)
Pfam domains (2) ------------------Glutaminase-2pbyD02 D:23-308 Pfam domains (2)
Pfam domains (3) ------------------Glutaminase-2pbyD03 D:23-308 Pfam domains (3)
Pfam domains (4) ------------------Glutaminase-2pbyD04 D:23-308 Pfam domains (4)
Sec.struct. author hhhhhhhhhhhhhhhhhhh.......hhhhh.....eeeee.....eeeee.....ee..hhhhhhhhhhhhhhhhhhhhhhhh....------------------....hhhhhhhhhh.....hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eehhhhhhhhhhhhhh............hhhhhhhhhhhhhhh....hhhhhhhhh...eee....eeeeee...eeeeee.........hhhhhhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pby D 5 NQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQSISKIIALALVLIDRGEDEVFHKVGMEP------------------LNPMINAGALVVTSMIQGGSVSERLERLLAFVRRLAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCAIEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCGMYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSIF 308
14 24 34 44 54 64 74 84 | - - |114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304
92 111
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |