Chain A from PDB Type:PROTEIN Length:105
aligned with Q82WP3_NITEU | Q82WP3 from UniProtKB/TrEMBL Length:100
Alignment length:105
1
| 3 13 23 33 43 53 63 73 83 93
Q82WP3_NITEU - -------MYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPRKGVIYGGLYPTG 98
SCOP domains -------d2omoa1 A:1-98 Hypothetical protein NE0621 SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eeeeeeee.hhhhhhhhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee.hhhhhhhhh.hhhhhhhhhhhhhhh....eeeeeeeee... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
2omo A -6 NLYFQGHmYVTIVYASVKTDKTEAFKEATRmNHEQSIREPGNmRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWmAEPRKGVIYGGLYPTG 98
| 3 13 23| 33 | 43 53 63 73 83 93
1-MSE 24-MSE 36-MSE 82-MSE
Chain B from PDB Type:PROTEIN Length:105
aligned with Q82WP3_NITEU | Q82WP3 from UniProtKB/TrEMBL Length:100
Alignment length:105
1
| 3 13 23 33 43 53 63 73 83 93
Q82WP3_NITEU - -------MYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPRKGVIYGGLYPTG 98
SCOP domains d2omob_ B: Hypothetical protein NE0621 SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eeeeeeee.hhhhhhhhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee.hhhhhhhhh.hhhhhhhhhhhhhhh....eeeeeeeee... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
2omo B -6 NLYFQGHmYVTIVYASVKTDKTEAFKEATRmNHEQSIREPGNmRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWmAEPRKGVIYGGLYPTG 98
| 3 13 23| 33 | 43 53 63 73 83 93
1-MSE 24-MSE 36-MSE 82-MSE
Chain C from PDB Type:PROTEIN Length:104
aligned with Q82WP3_NITEU | Q82WP3 from UniProtKB/TrEMBL Length:100
Alignment length:104
1
| 4 14 24 34 44 54 64 74 84 94
Q82WP3_NITEU - ------MYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPRKGVIYGGLYPTG 98
SCOP domains d2omoc_ C: Hypothetical protein NE0621 SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeeee....hhhhhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee.hhhhhhhhh.hhhhhhhhhhhhhhh....eeeeeeeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
2omo C -5 LYFQGHmYVTIVYASVKTDKTEAFKEATRmNHEQSIREPGNmRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWmAEPRKGVIYGGLYPTG 98
| 4 14 24 34 | 44 54 64 74 |84 94
1-MSE 24-MSE 36-MSE 82-MSE
Chain D from PDB Type:PROTEIN Length:104
aligned with Q82WP3_NITEU | Q82WP3 from UniProtKB/TrEMBL Length:100
Alignment length:104
1
| 3 13 23 33 43 53 63 73 83 93
Q82WP3_NITEU - -------MYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPRKGVIYGGLYPT 97
SCOP domains d2omod_ D: Hypothetical protein NE0621 SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eeeeeeee.hhhhhhhhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee.hhhhhhhhh.hhhhhhhhhhhhhhh....eeeeeeeee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
2omo D -6 NLYFQGHmYVTIVYASVKTDKTEAFKEATRmNHEQSIREPGNmRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWmAEPRKGVIYGGLYPT 97
| 3 13 23| 33 | 43 53 63 73 83 93
1-MSE 24-MSE 36-MSE 82-MSE
Chain E from PDB Type:PROTEIN Length:95
aligned with Q82WP3_NITEU | Q82WP3 from UniProtKB/TrEMBL Length:100
Alignment length:95
10 20 30 40 50 60 70 80 90
Q82WP3_NITEU 1 MYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPRKGVIYGGLY 95
SCOP domains d2omoe_ E: Hypothetical protein NE0621 SCOP domains
CATH domains ----------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee.hhhhhhhhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee.hhhhhhhhh.hhhhhhhhhhhhhhh....eeeeeeeee Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
2omo E 1 mYVTIVYASVKTDKTEAFKEATRmNHEQSIREPGNmRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWmAEPRKGVIYGGLY 95
| 10 20 | 30 | 40 50 60 70 80 | 90
1-MSE 24-MSE 36-MSE 82-MSE
Chain F from PDB Type:PROTEIN Length:96
aligned with Q82WP3_NITEU | Q82WP3 from UniProtKB/TrEMBL Length:100
Alignment length:96
1
| 8 18 28 38 48 58 68 78 88
Q82WP3_NITEU - --MYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPRKGVIYGGL 94
SCOP domains d2omof_ F: Hypothetical protein NE0621 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...eeeeeeeee...hhhhhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee.hhhhhhhhh.hhhhhhhhhhhh..eeeeeeeeeeeee Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------ Transcript
2omo F -1 GHmYVTIVYASVKTDKTEAFKEATRmNHEQSIREPGNmRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWmAEPRKGVIYGGL 94
| 8 18 | 28 |38 48 58 68 78 | 88
1-MSE 24-MSE 36-MSE 82-MSE
Chain G from PDB Type:PROTEIN Length:99
aligned with Q82WP3_NITEU | Q82WP3 from UniProtKB/TrEMBL Length:100
Alignment length:99
1
| 8 18 28 38 48 58 68 78 88
Q82WP3_NITEU - --MYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPRKGVIYGGLYPT 97
SCOP domains d2omog_ G: Hypothetical protein NE0621 SCOP domains
CATH domains --------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeee....hhhhhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee.hhhhhhhhh.hhhhhhhhhhhhhhh....eeeeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
2omo G -1 GHmYVTIVYASVKTDKTEAFKEATRmNHEQSIREPGNmRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWmAEPRKGVIYGGLYPT 97
| 8 18 | 28 |38 48 58 68 78 | 88
1-MSE 24-MSE 36-MSE 82-MSE
Chain H from PDB Type:PROTEIN Length:99
aligned with Q82WP3_NITEU | Q82WP3 from UniProtKB/TrEMBL Length:100
Alignment length:99
1
| 8 18 28 38 48 58 68 78 88
Q82WP3_NITEU - --MYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPRKGVIYGGLYPT 97
SCOP domains d2omoh_ H: Hypothetical protein NE0621 SCOP domains
CATH domains --------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) --ABM-2omoH01 H:1-77 -------------------- Pfam domains (1)
Pfam domains (2) --ABM-2omoH02 H:1-77 -------------------- Pfam domains (2)
Pfam domains (3) --ABM-2omoH03 H:1-77 -------------------- Pfam domains (3)
Pfam domains (4) --ABM-2omoH04 H:1-77 -------------------- Pfam domains (4)
Pfam domains (5) --ABM-2omoH05 H:1-77 -------------------- Pfam domains (5)
Pfam domains (6) --ABM-2omoH06 H:1-77 -------------------- Pfam domains (6)
Pfam domains (7) --ABM-2omoH07 H:1-77 -------------------- Pfam domains (7)
Pfam domains (8) --ABM-2omoH08 H:1-77 -------------------- Pfam domains (8)
Sec.struct. author ..eeeeeeeeee...hhhhhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee.hhhhhhhhh.hhhhhhhhhhhh..eeeeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
2omo H -1 GHmYVTIVYASVKTDKTEAFKEATRmNHEQSIREPGNmRFDILQSADDPTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWmAEPRKGVIYGGLYPT 97
| 8 18 | 28 |38 48 58 68 78 | 88
1-MSE 24-MSE 36-MSE 82-MSE
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |