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(-) Description

Title :  J-DOMAIN OF DNJ-12 FROM CAENORHABDITIS ELEGANS
 
Authors :  J. Osipiuk, N. Maltseva, M. Gu, C. Voisine, R. I. Morimoto, A. Joachimia Center For Structural Genomics (Mcsg)
Date :  20 Dec 06  (Deposition) - 23 Jan 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.86
Chains :  Asym./Biol. Unit :  A
Keywords :  Hsp40, J-Domain, Chaperone, Apc90013. 2, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Osipiuk, N. Maltseva, M. Gu, C. Voisine, R. I. Morimoto, A. Joachimiak
X-Ray Crystal Structure Of J-Domain Of Dnj-12 From Caenorhabditis Elegans.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN DNJ-12
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 1-70
    Gene: DNJ-12
    Organism Scientific: CAENORHABDITIS ELEGANS
    Organism Taxid: 6239

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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Chain A from PDB  Type:PROTEIN  Length:66
 aligned with O45502_CAEEL | O45502 from UniProtKB/TrEMBL  Length:402

    Alignment length:66
                                    12        22        32        42        52        62      
          O45502_CAEEL    3 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGG 68
               SCOP domains d2ocha_ A: automated matches                                       SCOP domains
               CATH domains 2ochA00 A:3-68  [code=1.10.287.110, no name defined]               CATH domains
               Pfam domains ---DnaJ-2ochA01 A:6-65                                         --- Pfam domains
         Sec.struct. author ...hhhhhhh.....hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------ Transcript
                  2och A  3 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGG 68
                                    12        22        32        42        52        62
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: Chaperone-J (14)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (O45502_CAEEL | O45502)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0031072    heat shock protein binding    Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0051082    unfolded protein binding    Interacting selectively and non-covalently with an unfolded protein.
biological process
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0009408    response to heat    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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(-) Related Entries Specified in the PDB File

1bqz J-DOMAIN OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT OF THE MOLECULAR CHAPERONE DNAJ, NMR RELATED ID: APC90013.2 RELATED DB: TARGETDB
2o37 J-DOMAIN OF SIS1 PROTEIN FROM SACCHAROMYCES CEREVISIAE.