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(-) Description

Title :  CRYSTAL STRUCTURE OF PROTEIN ATU2016, PUTATIVE SUGAR BINDING PROTEIN
 
Authors :  C. Chang, X. Xu, J. Gu, A. Savchenko, A. M. Edwards, A. Joachimiak, Midwe For Structural Genomics (Mcsg)
Date :  18 Dec 06  (Deposition) - 16 Jan 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Agrobacterium Tumefaciens, Putavite Sugar Binding Protein, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, X. Xu, J. Gu, A. Savchenko, A. M. Edwards, A. Joachimiak
Crystal Structure Of Protein Atu2016, Putative Sugar Bindin Protein
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN ATU2016
    Atcc: 33970
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3) DERIVATIVE
    Expression System Taxid: 562
    Expression System Vector Type: PET DERIVATIVE
    Gene: AGR_C_3656, ATU2016
    Organism Scientific: AGROBACTERIUM TUMEFACIENS STR.
    Organism Taxid: 176299
    Strain: C58
    Synonym: AGR_C_3656P

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 6)

Asymmetric Unit (1, 6)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 12)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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Chain A from PDB  Type:PROTEIN  Length:151
 aligned with A9CIE0_AGRFC | A9CIE0 from UniProtKB/TrEMBL  Length:149

    Alignment length:151
                                1                                                                                                                                                  
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136       146 
         A9CIE0_AGRFC     - ----MLKNIDPALNADVLHALRAMGHGDTLVISDTNFPSDSVARQTTVGKVLHIDNVSAARAMKAILSVLPLDTPLQPSVGRMEVMGAPDQLEPVQVEVQQEIDAAEGKSAPMYGIERFAFYEKAKQAYCVITTGETRFYGCFLLTKGVIP 147
               SCOP domains ----d2ob5a1 A:1-147 Hypothetical protein Atu2016                                                                                                        SCOP domains
               CATH domains 2ob5A00 A:-3-147 RbsD-like domain                                                                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhh....eeeee....hhhhhhh.......ee....hhhhhhhhhhh...........eeee.........hhhhhhhhhhhhhhhh.....eeehhhhhhhhhhh..eeee.........eeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ob5 A  -3 YFQGmLKNIDPALNADVLHALRAmGHGDTLVISDTNFPSDSVARQTTVGKVLHIDNVSAARAmKAILSVLPLDTPLQPSVGRmEVmGAPDQLEPVQVEVQQEIDAAEGKSAPmYGIERFAFYEKAKQAYCVITTGETRFYGCFLLTKGVIP 147
                                |    6        16   |    26        36        46        56  |     66        76  |  |  86        96       106  |    116       126       136       146 
                                |                 20-MSE                                 59-MSE              79-MSE                       109-MSE                                  
                                1-MSE                                                                           82-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A   (A9CIE0_AGRFC | A9CIE0)
molecular function
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0048029    monosaccharide binding    Interacting selectively and non-covalently with any monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides.
biological process
    GO:0005996    monosaccharide metabolic process    The chemical reactions and pathways involving monosaccharides, the simplest carbohydrates. They are polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides.

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