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(-) Description

Title :  SOLUTION STRUCTURE OF PUTATIVE PERIPLASMIC PROTEIN: NORTHEST STRUCTURAL GENOMICS TARGET STR106
 
Authors :  Q. Zhang, G. Liu, H. Wang, C. Nwosu, K. Cunningham, L. C. Ma, R. Xiao, J. Liu, M. C. Baran, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  25 Oct 06  (Deposition) - 28 Nov 06  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Gft Nmr, Str106, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Q. Zhang, G. Liu, H. Wang, C. Nwosu, K. Cunningham, L. C. Ma, R. Xiao, J. Liu, M. C. Baran, G. V. T. Swapna, T. B. Acton, G. T. Montelione, T. Szyperski
Solution Structure Of Putative Periplasmic Protein: Northest Structural Genomics Target Str106
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE PERIPLASMIC PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: YAHO
    Organism Scientific: SALMONELLA CHOLERAESUIS
    Organism Taxid: 591

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:99
 aligned with Q57SJ8_SALCH | Q57SJ8 from UniProtKB/TrEMBL  Length:91

    Alignment length:99
                                                                                                                     91        
                                    10        20        30        40        50        60        70        80        90|        
          Q57SJ8_SALCH    1 MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK--------  -
               SCOP domains d2noca1 A:1-91 Putative periplasmic protein YahO                                           -------- SCOP domains
               CATH domains --------------------2nocA01 A:21-91 YdgH-like domains                                      -------- CATH domains
               Pfam domains -----------------------------------DUF1471-2nocA01 A:36-89                               ---------- Pfam domains
         Sec.struct. author ......................ee.hhhhhhhhh..eeeeeeee.....hhhhhhhhhhhhhhhh...eee............eeeeeee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
                  2noc A  1 MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKKLEHHHHHH 99
                                    10        20        30        40        50        60        70        80        90
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: DUF1471] (2)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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