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(-) Description

Title :  EC-NMR STRUCTURE OF ESCHERICHIA COLI YIAD DETERMINED BY COMBINING EVOLUTIONARY COUPLINGS (EC) AND SPARSE NMR DATA. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER553
 
Authors :  Y. Tang, Y. J. Huang, T. A. Hopf, C. Sander, D. Marks, G. T. Montelione, No Structural Genomics Consortium (Nesg)
Date :  17 Jun 15  (Deposition) - 01 Jul 15  (Release) - 12 Aug 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Ec-Nmr, Northeast Structural Genomics Consortium, Nesg, Protein Structure Initiative, Psi-Biology, Structural Genomics, Lipid Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Tang, Y. J. Huang, T. A. Hopf, C. Sander, D. S. Marks, G. T. Montelione
Protein Structure Determination By Combining Sparse Nmr Dat With Evolutionary Couplings.
Nat. Methods V. 12 751 2015
PubMed-ID: 26121406  |  Reference-DOI: 10.1038/NMETH.3455

(-) Compounds

Molecule 1 - PROBABLE LIPOPROTEIN YIAD
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PGEX-6P
    Fragment: C-TERMINAL RESIDUES 59-199
    Gene: YIAD, B3552, JW5657
    Organism Scientific: ESCHERICHIA COLI K-12
    Organism Taxid: 83333
    Strain: K12

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2N48)

(-) Sites  (0, 0)

(no "Site" information available for 2N48)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N48)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N48)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N48)

(-) Exons   (0, 0)

(no "Exon" information available for 2N48)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:149
                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh.....eeeee..eeeeeeehhhhh.......hhhhhhhhhhhhhhhhhh..eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeee...........hhhhhhhhheeeeeeee......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2n48 A   1 YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPLLEHHHHHH 149
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N48)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N48)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N48)

(-) Gene Ontology  (4, 4)

NMR Structure(hide GO term definitions)

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  2n48
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  YIAD_ECOLI | P37665
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  YIAD_ECOLI | P37665
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        YIAD_ECOLI | P37665: 2k1s

(-) Related Entries Specified in the PDB File

2k1s RELATED ID: 15638 RELATED DB: BMRB RELATED ID: NESG-ER553 RELATED DB: TARGETTRACK
2n42
2n44
2n45
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2n47
2n49
2n4a
2n4b
2n4c
2n4d
2n4f